Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1431 ATGAAGTACGTTTTGGTGACTGGTGGAGTTGTTAGTGGACTTGGCAAAGGAGTGACTGCTAGCAGCATTGGAGTACTCCTTCAGGCTTGTGGCTTTCGAGTTACCTCTATCAAAATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTGTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTAACCCGCGACAATAATATCACAACTGGAAAAATTTATCAGTCTGTTGTTGAGAAGGAAAGAAGAGGAGATTATCTTGGCAAAACTGTCCAGGTTGTTCCACACATCACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCACAAGTACCGGTTGATGGAAAAGAAGGCCCTGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGACATCGAGTCGATGCCCTTTATTGAAGCACTTGGCCAATTTTCGTACCGCGTAGGCCCTAGCAACTTCTGTTTGGTTCATGTTAGCCTCGTGCCTGTTCTTAATGTTGTTGGTGAACAGAAAACAAAACCAACCCAGCACAGTGTCCGTCAACTTAGAGGGTTAGGGTTGATCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGATAATGTCAAGGGAAAACTCTCTCAATTTTGTCATGTGCCGTTATCAAACATACTCACTCTCTGTGATGTTCCAAATATCTGGCACATTCCTTTGCTGTTAAGAGACCAGAAGGCACATGAGGCAATCCTGAAAACATTAAACCTCCAAGGTGTTGCCACAGAGCCTGATTTTAAGGCGTGGATCACTACTACAAAAGTTTATCACAAATTTCATGAATCTGTTAGAATTGCAATGGTGGGAAAATATACTGGCCTTTCAGATGCATATCTTTCTGTATTGAAGGCACTTCTGCACGCTTCTGTTGCTTGCAACCGCAAGCTAGTTGTGGACTGGGTTCCTGCTGGGGATCTTGAAGATGATACCTTGAAAGAGAATCCTGATGCATATAAAGCTGCTTGGAGTCTTTTAGAGGGTGCTAATGGAATTCTAGTTCCAGGAGGTTTTGGTGACAGAGGAGTGCAAGGGAAAACTCTTGCTGCTAAGTATGCTCGAGAAAACAATGTTCCGTTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCGTTGAATTTGCAAGATCTGTTCTGGGTCTTCACGGTGCTAATAGCACTGAATTTGATCCCGAAACCAAAAACCCGTGTGTGATATTTATGCCTGAAGGTTCAAAGACACATATGGGTGGAACCATGCGTCTTGGTTCAAGGAGAACTTACTTTCAGGTTGCTGACTGCAAATCAGCCAAGTTGTATGGGAATGCAAGTTTTATCGATGAGCGACATCGCCATAGATACGAGGTTAATCCTGACATGATATCACAACTTGAGACTGCTGGTCTAACTTTTGTTGGCAAAGACGAAACTGGGAGGCGAATGGAGATAGTTGAAATGCGTGGTCATCCTTTCTTTATCGGTGCTCAGTTTCACCCTGAGTTCAAGTCGAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATAGAAGCAGCATGTAAGAGGACAGTTGTGTCAAATAACAAAGGAAATGCAAATTTAACCAATGGAGTACATGAATCAGACTCTACAACTTCGAAAGCACAAAATGCAAATGGGTTCAAATCTTCCAATGGTTCTGCAAATGGTGCAAGTCCTAATGGCAACGGTGTTTAA 1797 0.4324 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVVEKERRGDYLGKTVQVVPHITDAIQEWIERVAQVPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPSNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLIPNLLACRSSKELDDNVKGKLSQFCHVPLSNILTLCDVPNIWHIPLLLRDQKAHEAILKTLNLQGVATEPDFKAWITTTKVYHKFHESVRIAMVGKYTGLSDAYLSVLKALLHASVACNRKLVVDWVPAGDLEDDTLKENPDAYKAAWSLLEGANGILVPGGFGDRGVQGKTLAAKYARENNVPFLGICLGMQIAVVEFARSVLGLHGANSTEFDPETKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNASFIDERHRHRYEVNPDMISQLETAGLTFVGKDETGRRMEIVEMRGHPFFIGAQFHPEFKSRPGKPSPLFSGLIEAACKRTVVSNNKGNANLTNGVHESDSTTSKAQNANGFKSSNGSANGASPNGNGV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1431 598 Pfam Glutamine amidotransferase class-I 309 545 IPR017926 -
Mtr8g1431 598 MobiDBLite consensus disorder prediction 558 598 - -
Mtr8g1431 598 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Mtr8g1431 598 Gene3D - 1 293 IPR027417 -
Mtr8g1431 598 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Mtr8g1431 598 PANTHER CTP SYNTHASE 1 572 - -
Mtr8g1431 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Mtr8g1431 598 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Mtr8g1431 598 Gene3D - 294 557 IPR029062 -
Mtr8g1431 598 PANTHER CTP SYNTHASE 1 572 IPR004468 GO:0003883|GO:0006221
Mtr8g1431 598 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Mtr8g1431 598 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Mtr8g1431 598 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Mtr8g1431 598 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Mtr8g1431 598 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1431 Mtr-Chr8 17806427 17814497 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1431 8 17806427 17814497 Mtr8g1431 8 17806427 17814497 ECH
Mtr3g0644 3 8659320 8665599 Mtr8g1431 8 17806427 17814497 PCT
Mtr8g1431 8 17806427 17814497 Mtr2g2152 2 32111169 32118156 PCT