Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4100 ATGGGAGAGGAATCTATACCAAAATGGGAAGGTAAAGTCACCGTTGAGGTAAGAAACACCGTTGAAGAACAAGCATGGGCAGTGTTAGAAGATTTCTGCAACCTACACAAATGGATTCCAATAGACACATGTTACCAAGTTGATGGTGTTCAAGGCCAACCCGGTCTCATACGCTATTGTGCTTCAAACATAAAAGGTGTTGTTGAAGATGATGTTGTTGCTGAGCCTGAGACAACGATCAAGTGGGCAAAGGAAAAGCTGTTGAAAATTGATCCAATCAAACGTTGTTTGTCGTATGAAATTGTTGATAACAACATGGGATTTAAGTCTTATGTTGCAACACTGAAAGTGCTTCCAAACGAAGGTGATGCTAAAAGTGCAGGGTGTGGGATTGAGTGGGGGTTTGTTTGTGATCCAATAGAAGGGTGGACATTACAAGATTTCAACTCTTATATTGAGTACTGTCTTCAGTTCATGGCTAAGAAGATTGAGGTTGAATGCTCTGTAACTAGTCAGAGCTAA 522 0.408 MGEESIPKWEGKVTVEVRNTVEEQAWAVLEDFCNLHKWIPIDTCYQVDGVQGQPGLIRYCASNIKGVVEDDVVAEPETTIKWAKEKLLKIDPIKRCLSYEIVDNNMGFKSYVATLKVLPNEGDAKSAGCGIEWGFVCDPIEGWTLQDFNSYIEYCLQFMAKKIEVECSVTSQS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4100 173 PANTHER - 6 169 - -
Mtr3g4100 173 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 6 169 - -
Mtr3g4100 173 SUPERFAMILY Bet v1-like 23 164 - -
Mtr3g4100 173 CDD PYR_PYL_RCAR_like 9 164 - -
Mtr3g4100 173 Gene3D - 3 172 IPR023393 -
Mtr3g4100 173 Pfam Polyketide cyclase / dehydrase and lipid transport 13 149 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4100 Mtr-Chr3 54793979 54794730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4100 - - gmx:100798368 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4100 3 54793979 54794730 Mtr3g4100 3 54793979 54794730 ECH
Mtr3g4100 3 54793979 54794730 Mtr1g0416 1 4717767 4723785 ECH