Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3795 ATGGAGAACAATAAGGATCAACAAAGCATAACCTCGTATCTAAAGTTTTTCATTGCTAAACTATATTCCCGTAACTTCTTTGCTTTTAACCTAGCTTTTTGCTGCTGTTGTTTACTTGTTGGTATTACACTCACTTTTTGTGCCAAAACATTTTCATTCAACATTCAATTGCAACAACTCCAAAATCCACCCCTTATCTTCAATGAACCTTCTCATTTTTCTCCTCCTCCAATCTCATCCAACAACTCAACAAAATCACATTATCAAAACAACCAAACAAAATTTTCAATCAATGAAAATAGTTTGGAGGATTACTCGAAGATTCCAATGGTTACACATGATATGAACGATGATGAATTGTTTCGAAGAACTTCGTTGATTTCTATGATTCACGAACCTCCGTTCAATCAAACACCAAAGATTGCCTTTATGTTTTTGACAAAAGGTCCCGTCTTGTTAGCTCCTTTTTGGGAGAAATTCTTCAAAGGAAATGAAGGGATGTATTCAATCTACATTCATCCAAGTCCATCTTTCAATCAAACGGTTTACAATGAAAGATCTGTGTTTCATGGCCGAAGAATCCCAAGCAAGGAGGTAAAGTGGGGTGAGACTAGCATGATAGAGGCAGAGAGGCGTCTACTAGCAAATGCATTGCTTGATTTCTCAAACCAAAGATTTGTACTACTTTCAGAATCATGTATACCATTGTTCAATTTCTCCACAATTTATACTTATCTAATGAACTCAAATGAAACCTTTGTGGAAGCCAATGAGATTAAGAATTCACAATGGAAAAAAGGGTCTCAATGGTTTCAAATTGACCGTTACCTTGGACTTCACATAGTTTCTGACAAGACATATTTTTCTATGTTCAAAAAGTATTGCAACACTCCATGCTATAGTGATGAACATTACCTGCCAACTTTTATTAGCAACGAATTTGGGAAGAGAAATTCTAATAGGACTTTAACTTGGGTTGATTGGTCAAAAGGTGGACCCCATCCTTCAAGTTTTACAGGAAAAGATGTGACTACTGAATTTTTGGAGAGGTTGAGGTTTGGAAGCACTTGTGAGCACAATGGAAGGACATCCATTTGTCATTTGTTTGCAAGGAAGTTCACTCCTCATGCTTTGGATATATTGGTTAGATATGCTCCAAAGTTAATGCAATTCAATTGA 1179 0.3613 MENNKDQQSITSYLKFFIAKLYSRNFFAFNLAFCCCCLLVGITLTFCAKTFSFNIQLQQLQNPPLIFNEPSHFSPPPISSNNSTKSHYQNNQTKFSINENSLEDYSKIPMVTHDMNDDELFRRTSLISMIHEPPFNQTPKIAFMFLTKGPVLLAPFWEKFFKGNEGMYSIYIHPSPSFNQTVYNERSVFHGRRIPSKEVKWGETSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLMNSNETFVEANEIKNSQWKKGSQWFQIDRYLGLHIVSDKTYFSMFKKYCNTPCYSDEHYLPTFISNEFGKRNSNRTLTWVDWSKGGPHPSSFTGKDVTTEFLERLRFGSTCEHNGRTSICHLFARKFTPHALDILVRYAPKLMQFN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3795 392 PANTHER CORE-2/I-BRANCHING ENZYME 5 391 - -
Mtr3g3795 392 Pfam Core-2/I-Branching enzyme 141 260 IPR003406 GO:0016020|GO:0016757
Mtr3g3795 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 391 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3795 Mtr-Chr3 51776113 51778111 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3795 - - gmx:100791882 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3795 3 51776113 51778111 Mtr3g3795 3 51776113 51778111 ECH
Mtr3g3795 3 51776113 51778111 Mtr1g0408 1 4599474 4606024 ECH