Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3750 ATGGAAAGCTCGGAGATGATCAATGCTGGAAACCTCCCTGAGAAGACAACAAACACAAAATGTGTTTCCACTGACGACGAAAACATCATACTAAATCCTGAGTTCGAGGATGGCTTGAATAATTGGACTGGAAGAGGCTGCAAGATTGCAGTACATGAATCCATGGCAAATGGGAAAATCCTTCCGAAATCCGGGAAATTCTTTGCATCTGCAACCGAACGCACACAAAGCTGGAATGGAATTCAGCAAGAAATCACTGGACGAGTGCAGCGCAAGCTTGCCTATGAGGTCACTGCTTTAGTTCGGATATTTGGGAACAATGTCACTACTTCTGATGTACGTGCTACGTTGTATGTTCAAAAACCAGATCTTCGAGAGCAATATATAGGCATTGCCAATGTGCAGGCAACAGATAAAGATTGGGCTCAAATGCAGGGAAAGTTCCTTCTAAATGATTCCCCCTCAAAAGTAGTTGTTTATTTGGAAGGCCCCCCTGGAGGCACTGACATTCTTCTAAATACTTTTGTTATAAAGCATGCAGCTAAATCACCACCTTCGACACCCCCGGATTTTGAGAATGTTGCTTTTGGTGTTAATATAATCGAGAACAGCAATCTGGACAATGGCACTAACGGGTGGTCTCCTCTTGGTAATTGTACTTTGAGCGTCGGAACAGGTTCACCCCGTGTTATTCCACCAATGGCAAGAGACTCTCTCGGTCCTCATGAACCCCTGAGCGGACGTTACATTCTTGTAACCAATCGCACACAAACATATATGGGTCCTTCTCAGGCGATCACTGAGAAATTGAAACTCTATTTAACATATCAAGTATCTGCTTGGGTCAGGATTGGTTCTGGATCACATGGCCCTCAGAATGTTGGTATTGCCTTTAGTGTTGACGGCCAATGGGCCAACGGAGGACAGACCCAAGTTTCTGACAGCAGATGGCATGAAATCAGTGGTTCGTTTAGAATTGAAAAGCAGCCATCTAATGTTTTTGTTTACATTCAAGGTCCAGTTTCTGGTGTTGACTTAATGGTTGCTGGACTTCAAATTTTTCCTGTCGATAGGCTGGCAAGGTTTAGATATTTATGCGAGCAGACAGAGAAGATCCGTAAGCGTGATGTTACTTTAAAATTTTCTGGGGTGGACACAAGCGAGTATACCTTTGTGAAAGTTAAACAAATACAGAACGATTTTCCAATTGGATCGTGCATCAATAGAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTGTGCAACATTTTAACTGGGCTGTATTTGGTAATGAGTTGAAGTGGTTTTGGACAGAGCCACAGAAAGGGAATTTCAACTATAAGGATGCTGATGATATGTTGGACTTGTGTCAGAAGTACAAGATAGACATTCGTGGACATTGTATCTTCTGGGAAGTCGACAGCAATGTTCAACAATGGGTCAAATCACTGAATAAAAATGATTTACTGACGGCTGTCCAAAATCGCTTAACTGGCTTATTGTCTCGCTACAAAGGCAAGTTCAAGCACTATGATGTTAACAATGAAATGTTGCATGGTTCATTTTATCAAGACAGACTAGGTAAGGATATAAGGGCAAACATGTTCAAGATTGCACACCAGGTAGATCCATCTGCAACCCTATTTGTGAATGATTATCATGTTGAAGATGGAGACGACATGAATTCATCACCAGAAAAATACACACAACAGATTCTTGATTTGCAAGATCAAGGTGCACCGGTTGGGGGAATAGGAATTCAAGGTCACATTGATAGTCCTGTGGGGCCTATTGTTTGTGCTGCACTCGATAAGTTGGCTACTCTTGGTCAGCCAATTTGGTTTACCGAGCTTGATGTGTCTTCCACTAATGAATATGTTCGAGGTGATGATTTGGAAGTGATGTTGCGCGAAGCTATGGCACACCCTGCTGTTGATGGTGTAATGCTATGGGGATTTTGGGAGTTGTTTATGAGCCGCGACAATGCACATTTGGTGAATGCAGAAGGTGAAATCAATGAAGCTGGGAGAAGATTCATTGATCTTAAAGAAGAGTGGTTATCTCACACTCATGGTCATCTTGATGAGCAAGGGGAATTCAACTTCAGGGGATTCAGTGGTTTGTACAATGTGGAAATTGTTACCTTTGAAAAGGTAATTTGTCAGACATTCGTTGTTGATAAGGGTAACTCTTCATTGGTGATATCAATCGATTTGTAA 2223 0.4184 MESSEMINAGNLPEKTTNTKCVSTDDENIILNPEFEDGLNNWTGRGCKIAVHESMANGKILPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVTTSDVRATLYVQKPDLREQYIGIANVQATDKDWAQMQGKFLLNDSPSKVVVYLEGPPGGTDILLNTFVIKHAAKSPPSTPPDFENVAFGVNIIENSNLDNGTNGWSPLGNCTLSVGTGSPRVIPPMARDSLGPHEPLSGRYILVTNRTQTYMGPSQAITEKLKLYLTYQVSAWVRIGSGSHGPQNVGIAFSVDGQWANGGQTQVSDSRWHEISGSFRIEKQPSNVFVYIQGPVSGVDLMVAGLQIFPVDRLARFRYLCEQTEKIRKRDVTLKFSGVDTSEYTFVKVKQIQNDFPIGSCINRTNIDNEDFVDFFVQHFNWAVFGNELKWFWTEPQKGNFNYKDADDMLDLCQKYKIDIRGHCIFWEVDSNVQQWVKSLNKNDLLTAVQNRLTGLLSRYKGKFKHYDVNNEMLHGSFYQDRLGKDIRANMFKIAHQVDPSATLFVNDYHVEDGDDMNSSPEKYTQQILDLQDQGAPVGGIGIQGHIDSPVGPIVCAALDKLATLGQPIWFTELDVSSTNEYVRGDDLEVMLREAMAHPAVDGVMLWGFWELFMSRDNAHLVNAEGEINEAGRRFIDLKEEWLSHTHGHLDEQGEFNFRGFSGLYNVEIVTFEKVICQTFVVDKGNSSLVISIDL* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3750 740 Gene3D - 195 354 - -
Mtr3g3750 740 Gene3D - 21 180 - -
Mtr3g3750 740 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 388 683 IPR001000 GO:0004553|GO:0005975
Mtr3g3750 740 Pfam Glycosyl hydrolase family 10 396 654 IPR001000 GO:0004553|GO:0005975
Mtr3g3750 740 Pfam Carbohydrate binding domain 199 340 IPR003305 GO:0016798
Mtr3g3750 740 Pfam Carbohydrate binding domain 28 164 IPR003305 GO:0016798
Mtr3g3750 740 SUPERFAMILY Galactose-binding domain-like 26 180 IPR008979 -
Mtr3g3750 740 Gene3D Glycosidases 387 695 - -
Mtr3g3750 740 SUPERFAMILY (Trans)glycosidases 392 690 IPR017853 -
Mtr3g3750 740 PRINTS Glycosyl hydrolase family 10 signature 465 477 IPR001000 GO:0004553|GO:0005975
Mtr3g3750 740 PRINTS Glycosyl hydrolase family 10 signature 547 558 IPR001000 GO:0004553|GO:0005975
Mtr3g3750 740 PRINTS Glycosyl hydrolase family 10 signature 579 591 IPR001000 GO:0004553|GO:0005975
Mtr3g3750 740 SMART glyco_10 434 684 IPR001000 GO:0004553|GO:0005975
Mtr3g3750 740 PANTHER GLYCOSYL HYDROLASE 16 740 IPR044846 GO:0004553|GO:0005975
Mtr3g3750 740 SUPERFAMILY Galactose-binding domain-like 197 358 IPR008979 -
Mtr3g3750 740 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 16 740 - -
Mtr3g3750 740 Coils Coil 666 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3750 Mtr-Chr3 51337500 51341639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3750 22 740 Glycoside Hydrolase AT1G58370 70.263 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3750 - - gmx:100784250 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3750 3 51337500 51341639 Mtr3g3750 3 51337500 51341639 ECH
Mtr1g0415 1 4680482 4685962 Mtr3g3750 3 51337500 51341639 PCT