Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3738 ATGAAGTCCATGAATGACAGTAGTAACTCTGATGACAGAAACAACAATCATAACAACAATTGGTTAGGTTTCTCTCTCTCACCCCACATTTCTACTTCTTCTTCTCCTCATCATCATTACCAACATACTCAAACTTCTTCAGTTTCCAACACTGTTCCTACTTCTTTCTATTTTTCACCTTCTCACTTCACCAACTCAACAATCTGCTATGGTGTTCCTGAAAATGGTAACAACTTTCATTCACCTAATTTGACTGTTATGCCTATCAAGTCAGATGGATCACTTTGTATCATGGAAGCTCTTGGTAGATCACAATCACAAGTGATGGTGCCATCTTCATCTCCTAAACTAGAGGACTTTCTTGGTGGTGCAACAATGGGTAGTGATGAATATGGTAGCCATGAAAGTGAGGCAATGGCTTTAAGCTTAGACAGCATCTACTATAATAACCAACAAAATGCAGATCCTCATCAAGCTAATAGAGACCATTCCCTTGACCTTCTTTCAGAATCTTTCAGACAACAAACATCACATCCATATTATGCAGCACTTGGTTTCCATGGCCTATTTCAAGCACCATTAGAGGTAGAATCAAAGGAAAACATTAACCATGTTGATGTTTCTACTTCCCAAATGCCTCAAAACTGGTATCCTGCTTCTCAGGCTTTAGAGCAGCAAATGGGGAATCACAATGGTGGAGTTGGTGTTGGTGGTTCTTCTACTGTTGTTGGTTCTGTAGAAAGTGGTGAGTTACAATCTTTAAGCCTTTCAATGAGCCCTGGTTCTCAATCTAGCTGTGTTACTGTTCCTAGACAGATCTCACCTACTGGAACAGAATCAGTGACTATGGAGGCTAAAAAAAGAGGAGCTGCTAAGCTTGGTCAAAAGCAGCCTATTCATAGGAAATCTATTGACACTTTTGGACAGAGAACATCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAGGAAGGACAAACAAGAAAAGGAAGACAAGTATATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCAAGCAGCTCTTAAGTATTGGGGACCTTCAACACACATAAACTTCCCGCTTGAAAACTACCATACTCAACTTGAGGAAATGAAGAATATGACAAGGCAGGAATATGTTGCACATTTGAGAAGAAAAAGCAGTGGATTCTCAAGGGGTGCTTCAATGTACAGAGGCGTGACAAGACATCACCAACATGGTAGGTGGCAAGCTAGGATTGGAAGAGTTGCTGGTAACAAGGACCTTTACCTTGGAACATTCAGCACTCAAGAGGAAGCAGCAGAAGCATATGATGTAGCAGCAATAAAATTCCGTGGAGCAAATGCTGTCACAAATTTTGACATATCTAAATATGATGTTGAAAGGATCATGGCTAGCAATACTCTTCTTTCAGGTCAGCATGCAAGGAGAATCAAAGATAAGGATCCACAGACCGAAGTTCATGAATATAATCATAGTACTAATGTATCGAGCCAGACCAATGGAGAAGCCGCTGAAGCGCAAAAGGACAACGAAAATAATGATTCAAAATGGAAGATGGTTTTGCAACAACAGCAATCAAATAGTTGTGATCAAAAAATCATTGTGAATTCTGATGGAAGTTACAAGAATTCTGATTACTCTATGTCATTACAAGACCTTGTTGGTATTAATTCAGTTGGTTTGGATGATTCTACCAAAATAGGGACACATTTTTCAAATCCATCATCATTGGTGACAAGTTTAAGTAGTTCAAGAGAAGCTAGTCCTGATAAAACTGCTCCCTCACTACTCTTTCCAAAGCCTTCAATGGAATCAAAAATTGCCACTAATGTTGCTGTTAGTTCTTGGTTTCCTACACAAATGAGGCCAGCATCTTCAATCAATTTTTCACACTTCCCAGTTTTTGCTGCATGGAATGAGACCTAG 1986 0.3958 MKSMNDSSNSDDRNNNHNNNWLGFSLSPHISTSSSPHHHYQHTQTSSVSNTVPTSFYFSPSHFTNSTICYGVPENGNNFHSPNLTVMPIKSDGSLCIMEALGRSQSQVMVPSSSPKLEDFLGGATMGSDEYGSHESEAMALSLDSIYYNNQQNADPHQANRDHSLDLLSESFRQQTSHPYYAALGFHGLFQAPLEVESKENINHVDVSTSQMPQNWYPASQALEQQMGNHNGGVGVGGSSTVVGSVESGELQSLSLSMSPGSQSSCVTVPRQISPTGTESVTMEAKKRGAAKLGQKQPIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYHTQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISKYDVERIMASNTLLSGQHARRIKDKDPQTEVHEYNHSTNVSSQTNGEAAEAQKDNENNDSKWKMVLQQQQSNSCDQKIIVNSDGSYKNSDYSMSLQDLVGINSVGLDDSTKIGTHFSNPSSLVTSLSSSREASPDKTAPSLLFPKPSMESKIATNVAVSSWFPTQMRPASSINFSHFPVFAAWNET* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3738 661 SUPERFAMILY DNA-binding domain 312 381 IPR016177 GO:0003677
Mtr3g3738 661 SUPERFAMILY DNA-binding domain 414 475 IPR016177 GO:0003677
Mtr3g3738 661 Gene3D AP2/ERF domain 312 381 IPR036955 GO:0003700|GO:0006355
Mtr3g3738 661 Gene3D AP2/ERF domain 415 475 IPR036955 GO:0003700|GO:0006355
Mtr3g3738 661 ProSiteProfiles AP2/ERF domain profile. 313 379 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 MobiDBLite consensus disorder prediction 511 526 - -
Mtr3g3738 661 Pfam AP2 domain 313 371 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 Pfam AP2 domain 416 465 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 MobiDBLite consensus disorder prediction 511 531 - -
Mtr3g3738 661 MobiDBLite consensus disorder prediction 255 281 - -
Mtr3g3738 661 CDD AP2 312 379 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 SMART rav1_2 313 385 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 SMART rav1_2 415 479 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 MobiDBLite consensus disorder prediction 255 283 - -
Mtr3g3738 661 MobiDBLite consensus disorder prediction 1 21 - -
Mtr3g3738 661 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 17 659 - -
Mtr3g3738 661 PRINTS Ethylene responsive element binding protein signature 314 325 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 PRINTS Ethylene responsive element binding protein signature 455 475 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 CDD AP2 414 475 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 ProSiteProfiles AP2/ERF domain profile. 415 473 IPR001471 GO:0003700|GO:0006355
Mtr3g3738 661 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 17 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3738 Mtr-Chr3 51204339 51208205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3738 1 506 AP2-EREBP Transcription Factor Family AT4G37750 51.287 2.76e-160 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mtr3g3738 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3738 K09285 - zju:107420624 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3738 3 51204339 51208205 Mtr3g3738 3 51204339 51208205 ECH
Mtr1g0430 1 4909144 4913676 Mtr3g3738 3 51204339 51208205 PCT