Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0644 ATGAAAGCTATAAGTCATTTCCTCCTCTATCTTTTTTCTCTGGCTACACTTTTGGCTGTTGTCACTGGAACTGCATCACAACATGTGCATCCAAGTCACTATGCTGCTTCATTCAACAGGACCCTTTTTCCTTCTGATTTTCTCTTTGGAATCGGTTCTTCTGCTTACCAGATTTTTCAGATAGAAGGAGCTTCAAATATAGATGGTAGAGGACCAAGTATATGGGACACCTTCACTAAACAACATCCAGAAAAGATTGGGGACCATAGCAGTGGTAATATTGGAGCTGATTTTTATCATCGATACAAGAGTGACATAAAGATTATGAAAGAAATTGGGTTGGACTCATACAGATTCTCCATCTCATGGTCAAGAATATTCCCAAAGGGCAAGGGAGCAGTCAATCCTATGGGAGTTAAATTCTACAATAATGTCATTAATGAGGTCCTAGCAAATGGCTTGATACCCTTTGTAACATTGTTTCATTGGGATCTTCCACAAAGTCTTGAAGATGAATACAAGGGATTTCTAAGTCCTAAAATAGTGAAGGATTTTGAAGCCTATGCTGATTTTTGCTTCAAGACATTTGGAGATAGGGTTAAGCATTGGGTGACACTTAATGAGCCTGTTTCCTACACCATTAATGGATACCATGGAGGCACTTCTCCACCTGCAAGATGCTCTAAATATGTTGGAAATTGCTCTACTGGTGACTCAACTACAGAACCCTACATTGTTGCTCATCACTTTATACTTTCTCATGCTGCTGCAGCCAAATTGTATAAGGCCAAATATCAGGCTCATCAAAAAGGAAAAATTGGAATTACCTTAATTACTCACTACTATGAACCATATTCCAATAGTGTTGCCGATCACAAAGCTGCAAGTAGAGCACTTGACTTTTTATTTGGATGGTTTGCTCATCCAATTACATATGGTCACTATCCCCAATCAATGATATCATCCTTAGGTAACAGACTCCCAAAATTCACAAAAGAAGAATATAAAATTATCAAAGGTTCCTATGATTTTCTTGGTGTGAATTATTACACCACATATTATGCACAAAGCATTCCACCAACCTATATCAACATGACCTACTTCACTGATATGCAAGCAAACCTCATTCCAATGAAGAATGGAGTAACTATTGGCTCCTCGACGGATTTGAACTGGCTATACGTCTATCCGAAGGGAATTCATCATCTTGTGACACACATCAAAGATACATACAAGAATCCACCAGTCTACATTACTGAAAATGGCATTGGTCAATCAAGGAATGACTCAATACCAGTCAACGTAGCCCGTAAAGATGGTATTAGGATCAGATACCATGATAGCCATCTCAAGTTCCTCCTTCAAGCAATAAAAGATGGTGCAAATGTGAAGGGGTACTATGCATGGTCATTTTCCGACAGCTATGAATGGGATGCAGGGTACACAGTACGATTTGGAATAATTTATGTCGATTTCGTTAACAATTTGAAGAGATATCCCAAGTACTCTGCTTTTTGGCTGCAAAAGTTCCTTCTCAAGGGAAAACACTAA 1551 0.3868 MKAISHFLLYLFSLATLLAVVTGTASQHVHPSHYAASFNRTLFPSDFLFGIGSSAYQIFQIEGASNIDGRGPSIWDTFTKQHPEKIGDHSSGNIGADFYHRYKSDIKIMKEIGLDSYRFSISWSRIFPKGKGAVNPMGVKFYNNVINEVLANGLIPFVTLFHWDLPQSLEDEYKGFLSPKIVKDFEAYADFCFKTFGDRVKHWVTLNEPVSYTINGYHGGTSPPARCSKYVGNCSTGDSTTEPYIVAHHFILSHAAAAKLYKAKYQAHQKGKIGITLITHYYEPYSNSVADHKAASRALDFLFGWFAHPITYGHYPQSMISSLGNRLPKFTKEEYKIIKGSYDFLGVNYYTTYYAQSIPPTYINMTYFTDMQANLIPMKNGVTIGSSTDLNWLYVYPKGIHHLVTHIKDTYKNPPVYITENGIGQSRNDSIPVNVARKDGIRIRYHDSHLKFLLQAIKDGANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNNLKRYPKYSAFWLQKFLLKGKH* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0644 516 SUPERFAMILY (Trans)glycosidases 31 511 IPR017853 -
Mtr3g0644 516 Pfam Glycosyl hydrolase family 1 41 511 IPR001360 GO:0004553|GO:0005975
Mtr3g0644 516 ProSitePatterns Glycosyl hydrolases family 1 active site. 416 424 IPR018120 -
Mtr3g0644 516 Gene3D Glycosidases 23 513 - -
Mtr3g0644 516 PANTHER BETA-GLUCOSIDASE 17 16 512 - -
Mtr3g0644 516 PANTHER GLYCOSYL HYDROLASE 16 512 IPR001360 GO:0004553|GO:0005975
Mtr3g0644 516 PRINTS Glycosyl hydrolase family 1 signature 341 355 IPR001360 GO:0004553|GO:0005975
Mtr3g0644 516 PRINTS Glycosyl hydrolase family 1 signature 416 424 IPR001360 GO:0004553|GO:0005975
Mtr3g0644 516 PRINTS Glycosyl hydrolase family 1 signature 439 450 IPR001360 GO:0004553|GO:0005975
Mtr3g0644 516 PRINTS Glycosyl hydrolase family 1 signature 460 477 IPR001360 GO:0004553|GO:0005975
Mtr3g0644 516 PRINTS Glycosyl hydrolase family 1 signature 484 496 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0644 Mtr-Chr3 8659320 8665599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0644 16 516 Glycoside Hydrolase AT5G44640 48.521 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0644 K22279 - gmx:100809047 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0644 3 8659320 8665599 Mtr3g0644 3 8659320 8665599 ECH
Mtr3g0644 3 8659320 8665599 Mtr8g1431 8 17806427 17814497 PCT