Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2225 ATGGAGCAACCACAACCCCTTGTAGACCAAAATTTTCCACTCTTTAAACCATCTCGCAAACCTTCCATTAACCCTACACTCCCCATTTCCAATAAACCTCAAAACGACGTCGTTACACACGAAACCCTTAATTCAAACCCCGAAAACACCACCGCTACATTCTCCGATCTCGGCCTCTCCGAATGGGCGGTAAAAACCTGCAAAGAACTCGGAATGAAAACTCCACGGCGCGTGCAGCAACACTGCATCCCTCAGATTCTAGCTGGCCGTCATGTAATCGGAATCGACCAAACTGGAAGCGGTAAAACAGCGGCATTTGCGCTTCCGATTCTGCAGCGGCTTGCTGAACATACGTTTGGTGTGTTTGCGCTTGTGGTGACGCCCACGCGCGAGCTTGCGTTTCAGTTGGCGGAGCAGTTTAGGGCGCTTGGTTCGTCGCTTCGGCTTCGGATTGCGGTGGTTGTTGGTGGTATGGATATGCTTAGACAGACTAAAGAGTTGGTTGCTAGGCCGCATCTTGTTATTGCTACTCCTGGGAGGATTAAGGTTTTGCTTAAGGATAATCCTGAAATTGCTCCGGTTTTCGCCAGGACTAAGTTTCTTGTCTTGGATGAAGCAGATCGAGTCCTGGATGTTGGTTTTCAGGATGAATTGAAATTTATATTTCAGTGCTTACCAGAAAACCGGCAAAACCTATTCTTTTCTGCAACAACAACTAGTAATTTGCAAAAGTTGCGTGAGCGTTATCAAGATAAGTTGTATGCCTTTGAAGCTTATGAAGGGTTTAAGACGGTTGAGAACCTTAAGCAACAGGTTGTATTCATCCCTAAAAATGTGAAGGATGTATATTTGTTGCATATCTTGTCTAAAATGGAAGATATGGGTATTAGGTCTGCCATCGTCTTTGTCTCTACATGCAGAGATTGCCATCGTTTAAATTTAATGCTGGAAGTGCTTGATCAAGAAGCTGCAGCTTTATATTCATTCAGATCACAGGCTCAGAGGCTTGAAGCACTTCATGACTTTAAATCGGGAAAGGTTCCTGTATTACTAGCAACTGATGTTGCTGGCCGTGGTCTGGATATACCTACAGTTGACCTTGTTATCAATTATGATGTTCCAAGGTTTCCAAGAGATTATATCCATCGTGTTGGTCGTACTGCAAGAGCAGGTAGAGGGGGACTCGCTTTGAGCCTTGTTACCCAGAATGATGTTGATCTCATTCGGGAAATAGAGACCCTTATTGAAAGGCAACTTGAAATGATTGAATACAAAGAAAATGAGGTCCTTTCTCTCATGAAAAAGGTTTTCAGTGCTAAGAATGTTGCAAAAATGAAGATGATGGATGATGGGTTTGAAGAGAAAGCGAAAGAGCGGAAAAAACAGAAACTGAAAATGCTAGAAGAGAAAGGATTATTGAAGCAAAGAAGTAAGAGAAAAAGAAATAAAGAATTTCCAAAGGGAAATAAACAGGAAAAAGTGGAATTGGATGCATCAGTAGATTTAACATCACTAAAGAAAAGGAGTAAAAAGAGAGAATAA 1542 0.4241 MEQPQPLVDQNFPLFKPSRKPSINPTLPISNKPQNDVVTHETLNSNPENTTATFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKELVARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATTTSNLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQLEMIEYKENEVLSLMKKVFSAKNVAKMKMMDDGFEEKAKERKKQKLKMLEEKGLLKQRSKRKRNKEFPKGNKQEKVELDASVDLTSLKKRSKKRE* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2225 513 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 49 482 - -
Mtr2g2225 513 CDD DEADc_DDX49 54 257 - -
Mtr2g2225 513 SMART ultradead3 71 271 IPR014001 -
Mtr2g2225 513 PANTHER RNA HELICASE 49 482 - -
Mtr2g2225 513 MobiDBLite consensus disorder prediction 458 499 - -
Mtr2g2225 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 411 IPR027417 -
Mtr2g2225 513 Pfam Helicase conserved C-terminal domain 284 391 IPR001650 -
Mtr2g2225 513 Gene3D - 263 507 IPR027417 -
Mtr2g2225 513 MobiDBLite consensus disorder prediction 485 499 - -
Mtr2g2225 513 MobiDBLite consensus disorder prediction 458 475 - -
Mtr2g2225 513 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 83 256 IPR014001 -
Mtr2g2225 513 Gene3D - 29 255 IPR027417 -
Mtr2g2225 513 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 202 210 IPR000629 -
Mtr2g2225 513 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 52 80 IPR014014 GO:0003724
Mtr2g2225 513 Pfam DEAD/DEAH box helicase 77 245 IPR011545 GO:0003676|GO:0005524
Mtr2g2225 513 Coils Coil 408 428 - -
Mtr2g2225 513 CDD SF2_C_DEAD 268 400 - -
Mtr2g2225 513 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 283 430 IPR001650 -
Mtr2g2225 513 SMART helicmild6 310 391 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2225 Mtr-Chr2 33534883 33541137 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2225 2 33534883 33541137 Mtr2g2225 2 33534883 33541137 ECH