Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2174 ATGAGTGGAATGAATAAAAAAAAATCACCGAATCTTGAACAACTTCGTATGGAACTAAAAACTAGAAGATACAGAAGACATAACCCATATACAAGACCCCAAACCCTAAACCCGCCAACAAAACCGTTTTCTTCAAGCTCAAGTTTCACCTCTTCAACTTCTCTCCCTCGCTCTTTTCCTAACAGAAAGCATCATCAACCACCACCGCCACCACCAAAACCTCCCGTGGCACGCAAGCAGCGATGTACCAATTGCCGGACTTGCTTCTCCGCACCACCTGGAGTGGTGCAGTTACCTTGTCCTATATGTCAAATGGCGTCGTCTGCGGTGAAAATCCAGTGTTTCCACTGTAAGGCGCTTGTGAAAGGACCGAGTGATTTGGTGCAGTTTCCGTGTCCGCTGTGTTTTGTTATTCTTGATGTTGGTGATGCTGATCGTAAACAAGAAGAAGAAGTTAACGAGCTGGTTGAAGAAGTGGAGCAGGAAGAAGGTGATGGAGGTGTCGCCGGAGAAACATTTACAGATTATCGACCATCCAAGCTATCTATCGGACCTCCACACCCAGATCCGATTGTAGAGACATCTTCTTTGTCTGCAGTGCAGCCACCCGAGCCTACTTATGATCCAATGATTAAGAATGATTTGGAACGTTCAAAGGCTTTGTCATGCTTGCAGATTGAGACATTGGTCTATGCTTGTCAGAGACACCTTCAACACATTCCCAGTGGTGCTAGGGCAGGATTCTTTCTTGGAGATGGAGCTGGTGTAGGTAAAGGTCGAACAGTTGCTGGGATAATCTGGGAGAACTGGCACCATGGAAGGAGAAAAGCCTTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCGAGAAGAGATTTGGATGATATGGGTGCAAGTTGCATTGCAGTGCATGCTTTGAATAAACTGCCTTATACTAAGCTTGATACAAAGTCTGTTGGAGTTAGGGAGGGAGTTATTTTCTCGACATACAGTAGCCTCATAGCATCATCTGACAGAGGTCGTACCCGTATGCAACAGCTTGTGCAGTGGTGTGGACCCAAGTTTGATGGTCTTATAATATTTGATGAGTGTCATAAAGCAAAAAATTTGGTTCCCGAAAAGGATAAGAAGCCAACGAAAACTGGTCAAGCAGTACTTGATATACAGGCTCAACTACCTGAAGCTCGGGTTGTTTATTGCTCAGCTACTGGTGCATCTGAACCTCGCAATATGGCTTATATGGTTCGTCTTGGCCTTTGGGGAGCTGGGACTTTTTTCCCTGATTTTGGTGAATTTCTAGGTGCTCTTAACAATGGGGGTGTTGGAGCTCTAGAACTAGTTGCAATGGACTTGAAAGCAAGGGGGATGTATTTATCTCGCACACTTAGCTACAAGGGTGCTGAGTTTGAAATTATTGACGCACCATTAGATGATAGAATGATGCATGCGTATAAAAAGGCTACAGAAGTTTGGATGGATTTGCGTAAGAAGTTGCAGTCTGTCATTGAGTTAATATCTGACAAAATTAATACCAGACAACTATGGCGATCATATTGGGCAAGCCACCAGAGATTCTTCAGACATATGTGTATGTCTTCTAAAGTTCCTACTGCAGTGAAACTGGTGAACCAAGCATTAATGGAAGACAAGTGTGTAGTCATAGGTCTGCAGAGTACGGGGGAAGCAAGGACAGAGGAAGCTGTTTCAAAATACGGCTCTGAATTTGATGACTTTATTTCTGGACCTCGTGAGTTGCTACTAAAATTTGTTGAGGACAATTTCCCATTGCCACAAAAGCCTGAACTTCTCCCCGAAGATGACGGAGTAAAGGAGCTTCAAAGGAAGAGGCACTTGGCAAGTCCTGATGTTTCAGGAAAATCTCGAGTCAGAAAAGTAGCTAAGCGGCAGCCGCCTAGTGATTCTGAAAGTGATGAAGAATCTGAAACTGCCTCTGTTCCTGAATCTTCTGATTCTGATTACGGACCAGAAGGGAATGAAAGTGCTGCCTCTGGTCTTGAATCTTCCGACTCTGATTATGAGGAGTTTCAGAAATGTGAAATTTGCAGCACTGAAGAGGAAAGGGACAACTTGTTGCAGTGTTCCCACTGTGGAAAATACGCTCATCACTCATGCTTGGTGCCACCAATTAGCGATTTTGTTCTTGAGGAATGGGCATGTGATTTGTGCAAGGATACAACCGTAAACTATCTCCCTCCTGGAACAGATATAATTGAACTCCAGAAAAGGTATGACACAGCCATGGAGTGCAAGAAAAATATATTAGAGATGATTTGTGCTTTGGATCTTCCAAACAATCCCTTGGATGATATTATTGATCAGTTAGGAGGCCATGACAAAGTTGCAGAAATTACAGGAAGGAAAGGAATGCTTGTGAGGGCCCCAAGTGGAACGGGTGTGTTTTATCAGACTCGAAATACAAAAGATGTCACTGCCGAGATGGTCAACATGAATGAGAAAAAGCTCTTTATGGAAGGTAAGAAGTTAGTGGCCATCATCTCTGAAGCTGGATCAGCTGGTGTTTCGTTGCAGGCAGACCGAAGAGTGATAAATCAGAAAAGAAGGGTTCACTTGACTCTTGAACTTCCATGGAGTGCCGACCGAGCAATTCAGCAGTTTGGAAGAACTCATAGATCCAATCAAGTCTCAGCACCAGAATACAGGTTACTATTTTCAAACCTTGGTGGAGAACGCCGGTTTGCATCAGCTGTTGCTAAGAGATTAGAATCCCTTGGAGCTTTGACTCAGGGAGATCGTAGGGCAGGGCCTTCGTTAAGTGCATATAATTATGATAGTGCTTATGGGAAGAGAGCACTGATGCTTTTGTACAATGGAATACTGGAGCGGGATCCCCTTCCTGTTGTACCTCCAGGATGCTTATCTGACAGACCAGATACAATCAAAGATTTTATTATGCAGGCAAAAGCTGCTCTTCTTTCCGTTGGAATTTTTAAGGACGACGGCCTTGGAGATGATGATATGAATTGCTACATTGATGATAAAAATGATATACACAATATTGGACGATTTCTCAACCGGCTTTTAGGAATAGCTCCTGAGACTCAGAATAGGCTATTTGAGTTATTTGTGAATATCTTGGATCTTCTTGTTAATAAAGCTCGCATTGAAGGTAACCTTGATACAGGCATTGTTGACTTGAAAGCTAATGTCATTGAACTGCAAGGGACTCCAAAGACAGTCTATGTTGATCAAATGAGCAGGGCTTCAACTGTTCTGTTCACATTCACCTTGGATCGTGGGGTTTCATGGGAGTTGGCAAATACCATGCTGAATGAGAAGCAGAAGGTTGGATTTTGTTCAACTGGTGATGGCTTCTATAAGTCCAAGAGGGAGTGGTTGGGAAAACGTCATGTTATTTTAGCATTTGAAAGTTCGGCTCCATCTATGTATAAGATAGTTCGTCCTCCTACCGGAGAATCAACGCGGGATATGCATCTGCTAGAATTAACTAGAAAATATTCAAAAGTTTCATCTTTAAAGGAGGCCCAAATTGGTTGGGAAACCGAATATGAAGCTTCATTTAAACAGTGCATGCATGGTCCCAATTGTAAGATTGGTAAGTTCTGTTCAGTTGGCTCAAGAATACAACAAGTAAATGTCTTAGGTGGTGTTATTCTTCCTGTTTGGGGAAACATAGATAAGGCGCTCTCTAAGCAGGCCCGACACATGCATAAGAGGCTACGCATTGTTCGTGTTGAAACTACATCAGATAACAGACATATAGTAGGGCTTCTTGTTCCTAATGCAGCAGTTGAAACTGTGCTTCAAGGTTTATCATACGTTATAGAACTGGATGATTGA 3843 0.4307 MSGMNKKKSPNLEQLRMELKTRRYRRHNPYTRPQTLNPPTKPFSSSSSFTSSTSLPRSFPNRKHHQPPPPPPKPPVARKQRCTNCRTCFSAPPGVVQLPCPICQMASSAVKIQCFHCKALVKGPSDLVQFPCPLCFVILDVGDADRKQEEEVNELVEEVEQEEGDGGVAGETFTDYRPSKLSIGPPHPDPIVETSSLSAVQPPEPTYDPMIKNDLERSKALSCLQIETLVYACQRHLQHIPSGARAGFFLGDGAGVGKGRTVAGIIWENWHHGRRKALWISVGSDLKFDARRDLDDMGASCIAVHALNKLPYTKLDTKSVGVREGVIFSTYSSLIASSDRGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGALNNGGVGALELVAMDLKARGMYLSRTLSYKGAEFEIIDAPLDDRMMHAYKKATEVWMDLRKKLQSVIELISDKINTRQLWRSYWASHQRFFRHMCMSSKVPTAVKLVNQALMEDKCVVIGLQSTGEARTEEAVSKYGSEFDDFISGPRELLLKFVEDNFPLPQKPELLPEDDGVKELQRKRHLASPDVSGKSRVRKVAKRQPPSDSESDEESETASVPESSDSDYGPEGNESAASGLESSDSDYEEFQKCEICSTEEERDNLLQCSHCGKYAHHSCLVPPISDFVLEEWACDLCKDTTVNYLPPGTDIIELQKRYDTAMECKKNILEMICALDLPNNPLDDIIDQLGGHDKVAEITGRKGMLVRAPSGTGVFYQTRNTKDVTAEMVNMNEKKLFMEGKKLVAIISEAGSAGVSLQADRRVINQKRRVHLTLELPWSADRAIQQFGRTHRSNQVSAPEYRLLFSNLGGERRFASAVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMLLYNGILERDPLPVVPPGCLSDRPDTIKDFIMQAKAALLSVGIFKDDGLGDDDMNCYIDDKNDIHNIGRFLNRLLGIAPETQNRLFELFVNILDLLVNKARIEGNLDTGIVDLKANVIELQGTPKTVYVDQMSRASTVLFTFTLDRGVSWELANTMLNEKQKVGFCSTGDGFYKSKREWLGKRHVILAFESSAPSMYKIVRPPTGESTRDMHLLELTRKYSKVSSLKEAQIGWETEYEASFKQCMHGPNCKIGKFCSVGSRIQQVNVLGGVILPVWGNIDKALSKQARHMHKRLRIVRVETTSDNRHIVGLLVPNAAVETVLQGLSYVIELDD* 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2174 1280 Pfam PHD-finger 686 731 IPR019787 -
Mtr2g2174 1280 MobiDBLite consensus disorder prediction 62 77 - -
Mtr2g2174 1280 MobiDBLite consensus disorder prediction 654 677 - -
Mtr2g2174 1280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 633 736 IPR013083 -
Mtr2g2174 1280 SMART PHD_3 685 731 IPR001965 -
Mtr2g2174 1280 Gene3D - 217 417 IPR027417 -
Mtr2g2174 1280 MobiDBLite consensus disorder prediction 614 678 - -
Mtr2g2174 1280 MobiDBLite consensus disorder prediction 30 60 - -
Mtr2g2174 1280 PANTHER OS08G0223700 PROTEIN 82 1280 - -
Mtr2g2174 1280 MobiDBLite consensus disorder prediction 614 643 - -
Mtr2g2174 1280 MobiDBLite consensus disorder prediction 1 78 - -
Mtr2g2174 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 429 IPR027417 -
Mtr2g2174 1280 Gene3D - 796 909 IPR027417 -
Mtr2g2174 1280 Pfam C-terminal domain on Strawberry notch homologue 773 1059 IPR026937 -
Mtr2g2174 1280 Pfam P-loop containing NTP hydrolase pore-1 186 486 IPR039187 -
Mtr2g2174 1280 ProSiteProfiles Zinc finger PHD-type profile. 683 733 IPR019787 -
Mtr2g2174 1280 Coils Coil 145 165 - -
Mtr2g2174 1280 PANTHER STRAWBERRY NOTCH-RELATED 82 1280 IPR026741 GO:0006355
Mtr2g2174 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 933 IPR027417 -
Mtr2g2174 1280 SUPERFAMILY FYVE/PHD zinc finger 674 732 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2174 Mtr-Chr2 32430189 32526833 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr2g2174 AAA_34 7.5e-132 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2174 2 32430189 32526833 Mtr2g2174 2 32430189 32526833 ECH