Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2153 ATGATTTTGCTGACTCAACAAATAGCCCAACCACTTTTCATCATTTCATATAAATCAAACCCTTCATTCAATAACCATGTGCAACTTCATCAAGGTTTCACTTTGCACACACCATTTTCACAACTGCCCATTATGCCCCTTTCCAATGGAAGGCCTTTCAGGAGAAAGAATTTCAACAAATGTGTCTCTGAATCAGGACAGTCTCCATTGCCAACTGACCCAGATAAGAAAGATGAGATAGTGGGAGAAACCAGTGATGGTGTGGTGGAAGTGCAGGGTGAGAATCCTGATCTTCAGACACTTTTTAGAAGGTTTTGGAAAGTGGCAGCTCCTTATTGGAGTTCTGATGATAAGGTTCAAGCAAGATTGCAGCTTGCTGGTGTTTTTGCTCTCACTTTGGCTACTACTGGAATTAGTGTTGGTTTCAGTTTTCTAGGGAGAGATTTCTATAATGCACTTGCCAACAAGGATCAAGAGCAATTTACAAAGCAGCTACTTTACTACTTGGGTGGTTTTGCTGGAGGAATCCCGTTTTTTGTATTGAGAGACTATGCAAGAGAAACTCTTTCATTGAGATGGAGGTCTTGGATGACGAGGTATTACATGGATCGCTACTTGAAGGATCAGACATTCTATAAAATTCAATCACAATCAATTATTGATAATCCAGACCAGCGAATTGTTGATGATCTAAGTTCTTTCACCGGAACAGCCCTTTCTTTCTCTTTGGCACTCTTTAATGCTGCCATAGACTTGATCTCATTCAGTAACATCTTGTATGGAATATATCCTCCACTCTTTGTTGTTCTTCTCATATACTCTATTGGTGGTACAGCTATCAGTGTTTTCCTCGGAAAGGGGCTGGTGACTCTAAATTTCTTGCAAGAGAAAAAGGAAGCAGACTTTCGTTATGGACTTGTACGGGTTCGGGAAAATGCTGAGTCAATTGCTTTCTATGGTGGTGAAGAGAGTGAGATGCAACTTCTTCTGCAGCGGTTCAAAAGTGCTTTCGAAAATCTAACCCAACTACTGATTTCGTCTAGAAATCTGGAGTTCTTCACCAATGGTTACCGCTATGTCATTCAAGTTCTTCCAGCTGCTGTTGTTGCTCCCATGTATTTCTCTGGAAAAATCGAGTTTGGTGTTATTAACCAGTCAGTCTCTGCTTTTAATCACATCCTTGGTGACTTTTCTCTCATTGTATACCAGTTTCAAGCTATAAGTGCTTTTTCTGCTGTCATTAATCGGTTAGGTGAATTTGATGATATTTTGGACAGAAGCAACTCTAAATCTCTCTCTGATTCTTTAGAAGACATAGATATAATGTACAAAGATATTATAAGTTCATCTGCATTGGAATCCAATGGATTGACTCCACAAGAGAAACATGAAACATTACTGGAGATAGATAATTTGATTCTGAAGACACCAAGTGATTCTACACTTATTACAGACTTGTCATTGACAATCAAGGCAAAAGATAATTTACTAATAACAGGACCAAGTGGAAGTGGCAAAACATCTTTATTAAGAGTTATGGCTGGTCTATGGAGAACTGGAACCGGAAAGATCATATACTATGTAAAAGGTGGGGAAGATGCTGAGAAATCCATTAGTTCAGATGTGAATACTCCTCGTGATGTATCTGAAGATCGTGGAAAATCCATCAGCAGAAAATCCGGAATCTTTTTCCTACCTCAAAAGCCGTACATGGTTTTGGGCACTCTTCGTCAACAATTACTTTATCCAACTTGGGGTGACGATGTCGTTCCAACATTGGATAGTGATAAACAAAAAAATGTGCTTCCTTTCTTGTCAAACTCAGATGATATGAATAGTGAACTTATGAAGCCAAAAACAGACGAGCTGATAAAGATCTTAGAGGATGTTCGTCTTGGCTACATATTACCTCGGTTCGGGTTGGATTCAACACATGAATGGTCTAGTGTTCTCTCTCTGGGAGAACAGCAACGTCTAGCGTTTGCTCGTCTTTTGCTTTCAAAACCTCAACTAGCTCTACTGGATGAATCAACAAGCGCACTTGATGAAGCCAACGAGGTTTATTTGTATGAAAAGATTGCAGCAGCGGGCATAACATACATTAGTGTTGGCCATCGGTCAACCTTATCCAACTTCCACGACAGAATCCTACGCATATCTACAACCGATTCAAACAATGAACAGCCAAATTGGCACATCGAACCCACTAGACGTGAATCCTCTTTAAAAGTTTAG 2235 0.3978 MILLTQQIAQPLFIISYKSNPSFNNHVQLHQGFTLHTPFSQLPIMPLSNGRPFRRKNFNKCVSESGQSPLPTDPDKKDEIVGETSDGVVEVQGENPDLQTLFRRFWKVAAPYWSSDDKVQARLQLAGVFALTLATTGISVGFSFLGRDFYNALANKDQEQFTKQLLYYLGGFAGGIPFFVLRDYARETLSLRWRSWMTRYYMDRYLKDQTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLALFNAAIDLISFSNILYGIYPPLFVVLLIYSIGGTAISVFLGKGLVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLLISSRNLEFFTNGYRYVIQVLPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGEFDDILDRSNSKSLSDSLEDIDIMYKDIISSSALESNGLTPQEKHETLLEIDNLILKTPSDSTLITDLSLTIKAKDNLLITGPSGSGKTSLLRVMAGLWRTGTGKIIYYVKGGEDAEKSISSDVNTPRDVSEDRGKSISRKSGIFFLPQKPYMVLGTLRQQLLYPTWGDDVVPTLDSDKQKNVLPFLSNSDDMNSELMKPKTDELIKILEDVRLGYILPRFGLDSTHEWSSVLSLGEQQRLAFARLLLSKPQLALLDESTSALDEANEVYLYEKIAAAGITYISVGHRSTLSNFHDRILRISTTDSNNEQPNWHIEPTRRESSLKV* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2153 744 Pfam ABC transporter transmembrane region 2 117 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g2153 744 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 467 742 IPR003439 GO:0005524
Mtr2g2153 744 SUPERFAMILY ABC transporter transmembrane region 103 420 IPR036640 GO:0005524|GO:0016021
Mtr2g2153 744 Gene3D - 459 730 IPR027417 -
Mtr2g2153 744 SMART AAA_5 492 730 IPR003593 -
Mtr2g2153 744 Gene3D ABC transporter type 1, transmembrane domain 91 423 IPR036640 GO:0005524|GO:0016021
Mtr2g2153 744 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 79 735 - -
Mtr2g2153 744 MobiDBLite consensus disorder prediction 724 744 - -
Mtr2g2153 744 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 126 409 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g2153 744 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 79 735 - -
Mtr2g2153 744 Pfam ABC transporter 484 679 IPR003439 GO:0005524
Mtr2g2153 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 720 IPR027417 -
Mtr2g2153 744 ProSitePatterns ABC transporters family signature. 651 665 IPR017871 GO:0005524
Mtr2g2153 744 CDD ABCD_peroxisomal_ALDP 467 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2153 Mtr-Chr2 32121063 32131328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2153 48 742 Acyl Lipid Metabolism Gene Families AT1G54350 66.094 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2153 - - lja:Lj3g3v0937780.2 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2153 2 32121063 32131328 Mtr2g2153 2 32121063 32131328 ECH