Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0441 ATGGCAGTGTTATCAGAGATAGAAGAAGATGAACTCGATGAAGAACCAGGCGAAGTCATCGAATCAGCACCGCCTCAAAAGCTCGGCGAAGAGAGGCAACTCACTTCCAACTCGCCGATCAAGAAGAAGCTTCTCAAAATTGGACACGGTTGGGAAACTCCCAACTTCAGCGATCATGTTACTCTTCATTATGTTGGAACTTTGCTTGATGGAACCAAATTGGGTTCTACTAGGGATTCTGATTCTCCCGTCACATTTACACTTGGTCAAGGTGAATTGTATGCTGGATTGGATGATGGAATCGTCACCATGAAGAAAGGAGAGGTGGCATTGTTCACATTACCTGCTGTTGAGTCTGGAAGCATTCCACAAGACTCCAACTCGGTTGTGCAATTTGAGGTGGAACTCGTTTCTTGGATCACGGTGGTGGATGTTTGCAAAGATGGTAGAATTATCAAGAAAATTATGGAGAAGGGGAAAGGGAATGATCGACCCGGTGATCTTGATGAAGTCCTTGTGAAGTATCAGGTGGCACTTGAAGCTGGCACTGTTGTTGCAGAAACTCCGGAAGGAGGAGTTGAATTCTATGTGAATGATGGTCATCTTCTTCCTAGATTGCCAAAAGTGATCATGACTATGACAAGGGGCGAGAAAGCTGAATTAATTGTTCAACCTCAGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGCGGGTTCCGTTCAATTCCACCAGACTCAATGCTCTATATTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTTCACGGTGATTAAGAAGATTTTTAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAGGGTGCAAATGTTACTGTCAGATACACAGCTATGCTAGAAGATGGCACTGTATTCGAGAAAAGAGGAATTGATGAAACACAACCCTTGAAATTTGTAACTGATGAGGAACAAGTGATTACTGGTTTAGACCGAGCAGTGGCAACAATGAAGAAGGGTGAAAGGGCCATAATCAGTATACATCCTGATTATGCTTTTGGAAATGTTGAAGTGAAACAAGATCTTGCTATTGTGCCACCAGGCTCAAAAGTAGTGTATGACATTGAAATGGTGGATTTTATTAAGGAGAAAGCACCATGGGAGTTGAATAGTAATGAAAAAATTAAGGTGGCTGAGAGGAAGAAAGAAGAAGGAAATTTATTATTTAAAAGTGGCAAATATCAGCGAGCAGCGAAGAAGTATGATAAGGCTGCTGATTTTGTTAGCAGAGATGGATCTTTAGGGGATGATGAGGAAAAGTTAGCTAAATCATTAAGAGTTTCATGCTGGTTGAATGGTGCAGCTTGTTGCCTTAAACTGAATGACTTTCCTGGAGCAATCAAACTATGTACTCAGGTGCTTGATGTTGAGTTTCACAATGTGAAAGCTTTGTATAGACGAGCACAAGCATATATAGAGACAGAAGACTTTCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGAGGTGGATCCACAAAACAGGGAGGTAAAGGTACTAAAGATGAAATTGAAGCAACTTCAAGCTGATAGTGACAAAAAAGATGCTAAACTGTATGAAAGTATGTTTGCACCTAAAACAAAGAGATTGAAGGTTGAGAAAGAAGAGGATGAGGTGGTGAAAATGGATATGGGCAATGTTGGTGACAGCGCAGCTCCTTCTGATGGTTTAATTTTTGATTCCCGTTGA 1743 0.4159 MAVLSEIEEDELDEEPGEVIESAPPQKLGEERQLTSNSPIKKKLLKIGHGWETPNFSDHVTLHYVGTLLDGTKLGSTRDSDSPVTFTLGQGELYAGLDDGIVTMKKGEVALFTLPAVESGSIPQDSNSVVQFEVELVSWITVVDVCKDGRIIKKIMEKGKGNDRPGDLDEVLVKYQVALEAGTVVAETPEGGVEFYVNDGHLLPRLPKVIMTMTRGEKAELIVQPQYAFGEKGREAGSGFRSIPPDSMLYINIELVSFKPVINVTGDFTVIKKIFKEGEGAFTANEGANVTVRYTAMLEDGTVFEKRGIDETQPLKFVTDEEQVITGLDRAVATMKKGERAIISIHPDYAFGNVEVKQDLAIVPPGSKVVYDIEMVDFIKEKAPWELNSNEKIKVAERKKEEGNLLFKSGKYQRAAKKYDKAADFVSRDGSLGDDEEKLAKSLRVSCWLNGAACCLKLNDFPGAIKLCTQVLDVEFHNVKALYRRAQAYIETEDFLLADVDIKKALEVDPQNREVKVLKMKLKQLQADSDKKDAKLYESMFAPKTKRLKVEKEEDEVVKMDMGNVGDSAAPSDGLIFDSR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0441 580 MobiDBLite consensus disorder prediction 1 35 - -
Mtr1g0441 580 SMART tpr_5 479 512 IPR019734 GO:0005515
Mtr1g0441 580 SMART tpr_5 396 429 IPR019734 GO:0005515
Mtr1g0441 580 SMART tpr_5 445 478 IPR019734 GO:0005515
Mtr1g0441 580 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 287 379 IPR001179 GO:0003755
Mtr1g0441 580 SUPERFAMILY FKBP-like 144 259 - -
Mtr1g0441 580 SUPERFAMILY FKBP-like 34 146 - -
Mtr1g0441 580 MobiDBLite consensus disorder prediction 561 580 - -
Mtr1g0441 580 MobiDBLite consensus disorder prediction 1 18 - -
Mtr1g0441 580 Gene3D - 5 141 IPR046357 GO:0003755
Mtr1g0441 580 SUPERFAMILY FKBP-like 267 398 - -
Mtr1g0441 580 Gene3D - 142 259 IPR046357 GO:0003755
Mtr1g0441 580 ProSiteProfiles TPR repeat profile. 479 512 IPR019734 GO:0005515
Mtr1g0441 580 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 140 IPR001179 GO:0003755
Mtr1g0441 580 Gene3D - 261 381 IPR046357 GO:0003755
Mtr1g0441 580 PANTHER PEPTIDYLPROLYL ISOMERASE 271 379 - -
Mtr1g0441 580 PANTHER PEPTIDYLPROLYL ISOMERASE 378 560 - -
Mtr1g0441 580 PANTHER PEPTIDYLPROLYL ISOMERASE 5 265 - -
Mtr1g0441 580 Gene3D Tetratricopeptide repeat domain 382 539 IPR011990 GO:0005515
Mtr1g0441 580 Coils Coil 515 535 - -
Mtr1g0441 580 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 168 259 IPR001179 GO:0003755
Mtr1g0441 580 SUPERFAMILY TPR-like 390 541 IPR011990 GO:0005515
Mtr1g0441 580 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 375 IPR001179 GO:0003755
Mtr1g0441 580 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 137 IPR001179 GO:0003755
Mtr1g0441 580 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 165 256 IPR001179 GO:0003755
Mtr1g0441 580 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 378 560 - -
Mtr1g0441 580 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 265 - -
Mtr1g0441 580 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 271 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0441 Mtr-Chr1 5135312 5141364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0441 27 542 Calmodulin-binding Proteins AT3G25230 53.640 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0441 K09571 - gmx:100798382 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0441 1 5135312 5141364 Mtr1g0441 1 5135312 5141364 ECH