LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g0436	ATGGAAAAAATCTGCGTGGCCGTTAGAGTTCGTCCTCTCGTTTCTTCAGATTCCGTCAATGGAAGCTTCTGGAAGGTCCACGATAACCGCATTTCTCTTCACAAGATCCATGGAACTCCACTCTCTAATTCTTCTTATGCTTTCGATCATGTATTCGATGAATCTTGCTCGAATTCGAGTGTTTATGAGATTCTCACTAAGGATATCATTCTCGCTGCTCTCAATGGCTTCAACGGGACTGCATTTGCTTATGGGCAGACAAGCAGTGGGAAGACGTTCACCATGAATGGTTGTGAGACTGACCCGGGAGTGATTCCTCGGGCAGTCAAAGATATATTTTCAAAAATTGAGACGATGACTGAACGGGAGTTTTTAATTCGAGTTTCCTACATGGAGATTTATAATGAAGAGATTAACGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGTTTGGAGCGGGGAGTATTTGTTGCAGGGCTCAGAGAGGAAATTGTCAATAATGCTGAACAAGTTCTAGACCTCCTTAAAGTAGGGGAAGTGAATAGGCACTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGATCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGATTCCGATTCTTCTGATGATAGTTCAATAAGTGACATTGTTCGAGTTTCAGTCTTGAATTTAGTAGATCTTGCTGGCTCTGAAAGGATTGCAAAAACTGGAGCTGATGGAGTGCGTTTGAAAGAAGGAAAATACATTAACAAAAGCTTGATGATTCTAGGAAATGTTATTAATAAATTAAGTGAGGGTTCAAAAAATAGGGGACATATCCCATATCGTGATAGTAAATTAACACGTATACTCCAACCTGCTCTTGGTGGAAATGCCAAAACATCCATTATTTGCACCGTAGCACCAGAAGAGGATCACATTGAAGAAACAAAGGGAACTCTTCAGTTTGCTAGTAGAGCCAAACGCATCACCAATTGTGTTCAAGTGAATGAGATTCTAACAGATGCAGCCTTGTTAAAGCGGCAACAGCTAGAGATAGAAGAGCTACGTAAGAAACTTCAGGGATCTCATGCTGGGGTGCTCGAGCAAGAGGTTCTTAAACTCAGGAACGATTTACTCAAGTATGAAATGGAGCGTGGTAAGCTTGAAATGGAACTGGAAGAGGAGAGGAAATCGCGTAATCAATGGATTAGCGAGCAACAGATGAAAATTGAAAATTCCAGTACTACATCATTCTCAGTCTCAGATTGTGGGACTAACGACAATCAGGGACCTAGATATTTGAGGCGAGGATTAATTGAAGAGTACAGTGACATTAATAGTACATCTCAAGGAGATATATTTAAATCTCCCTGTTTAAAGACAGCCAGTGCTTTTGTTGTCAAGCGATCAAGAAATTCAACATTGCCAGATAGCAGTCCTTCTCTTCCCGAAGCTTTCAGCAATGTGGCTGACGAAGATATGTGGTTGAAAATGAACAATGGCTACGTTGCGGACCTTGATTCTCTTCAAATTACTCCCACTCGAAATATTCAATCATTCCCACTAAGTGATACAACTCCTGGTTGTATAAGTCAAACTGCAAAGTATGAACGAGAGGTTCAAGATTTGAGAAGACAACTAGAGCTTGCAAATGAAAAGATAAATGAACTGGAGAGAAAGAATTCAGAGGAAGTACCGTCAAGCAAGCAATTACTAGGCGAGAACCCAGACAATCAACAAGAAACACCGCTAATTCAAGAATTGCCTATGAGGTTATCAGAATATGTAGAAAACTACAAAGATAGCTTTGAGGAGGTTTTATCAGTAATGCAGAGATTTGCATTGGATGGAAAAGTCTCAACTGATAAGATGCTTTCAACCATGAGTGAAATTGGTGCAAATCTATTTGCAACTTTGGAAAGTCACTTTTCCACTGAGAACTATGCTGCAATCCGGGAACAACAAAAGGAGTTTCATGAGAGGATGAATAATTTAATTACATCACTGGAGTTATCAGAAAGCTCAATAACAGGAAATCAAAAGAGGACTGCTTTGTGCAGCTGTGAACACAAGGGCTCTGGTTTGGGAGGAGAAACAGAATCTGCTTACTCAAAGGATGCTTTGAATGAAAGATGTGAAAGCCTTGAAAGGGAGTTACAACTTTTGCAGATTGAAAGAGACTCTTTGCTAGAGAAGTTCTCTGAATCGTCTGATAAACTTGCAATTGTGTCAAGCCAAAAGGAAAATGCTTTGAAAGATTTAAACATTGAAGTACAGAGAAGGAAAAATCTAGAAGGGGAGGTTAAGCAATTTACTGCAGCTTTTGTCTGTCGTCAGAAATCGCTTACTTCCTTGCGTGGCGATCTTAAGACCAAAATTGAGAAATGGAGAACCCAAACACCAATTTCAGTGCCAAAGTCTTTTGATGGTCAGGACTAG	2451	0.3986	MEKICVAVRVRPLVSSDSVNGSFWKVHDNRISLHKIHGTPLSNSSYAFDHVFDESCSNSSVYEILTKDIILAALNGFNGTAFAYGQTSSGKTFTMNGCETDPGVIPRAVKDIFSKIETMTEREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVAGLREEIVNNAEQVLDLLKVGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKDSDSSDDSSISDIVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMILGNVINKLSEGSKNRGHIPYRDSKLTRILQPALGGNAKTSIICTVAPEEDHIEETKGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRKKLQGSHAGVLEQEVLKLRNDLLKYEMERGKLEMELEEERKSRNQWISEQQMKIENSSTTSFSVSDCGTNDNQGPRYLRRGLIEEYSDINSTSQGDIFKSPCLKTASAFVVKRSRNSTLPDSSPSLPEAFSNVADEDMWLKMNNGYVADLDSLQITPTRNIQSFPLSDTTPGCISQTAKYEREVQDLRRQLELANEKINELERKNSEEVPSSKQLLGENPDNQQETPLIQELPMRLSEYVENYKDSFEEVLSVMQRFALDGKVSTDKMLSTMSEIGANLFATLESHFSTENYAAIREQQKEFHERMNNLITSLELSESSITGNQKRTALCSCEHKGSGLGGETESAYSKDALNERCESLERELQLLQIERDSLLEKFSESSDKLAIVSSQKENALKDLNIEVQRRKNLEGEVKQFTAAFVCRQKSLTSLRGDLKTKIEKWRTQTPISVPKSFDGQD*	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g0436	816	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	364	IPR027417	-
	Mtr1g0436	816	PANTHER	CENTROMERE PROTEIN E	2	773	-	-
	Mtr1g0436	816	SMART	kinesin_4	1	341	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr1g0436	816	ProSitePatterns	Kinesin motor domain signature.	230	241	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Mtr1g0436	816	Coils	Coil	368	402	-	-
	Mtr1g0436	816	PANTHER	CENTROMERE PROTEIN E	2	773	-	-
	Mtr1g0436	816	ProSiteProfiles	Kinesin motor domain profile.	3	333	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr1g0436	816	Coils	Coil	537	567	-	-
	Mtr1g0436	816	PRINTS	Kinesin heavy chain signature	76	97	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr1g0436	816	PRINTS	Kinesin heavy chain signature	191	208	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr1g0436	816	PRINTS	Kinesin heavy chain signature	231	249	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr1g0436	816	PRINTS	Kinesin heavy chain signature	283	304	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr1g0436	816	Coils	Coil	751	771	-	-
	Mtr1g0436	816	Coils	Coil	709	736	-	-
	Mtr1g0436	816	Gene3D	Kinesin motor domain	1	365	IPR036961	-
	Mtr1g0436	816	MobiDBLite	consensus disorder prediction	562	583	-	-
	Mtr1g0436	816	CDD	KISc_CENP_E	3	333	-	-
	Mtr1g0436	816	Pfam	Kinesin motor domain	9	333	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g0436	Mtr-Chr1	5007458	5014626	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr1g0436	4	395	Miscellaneous Gene Families	AT2G21380	45.226	2.08e-93	314

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g0436	K11498		-	gmx:100804944	1178.7

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr1g0436	1	5007458	5014626	Mtr1g0436	1	5007458	5014626	ECH