Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0432 ATGGATCTTGGTGTAGTGAGTTTAGAAGGTTTGGTTAGTTCAGATCCTGAGTCAAAAAACAAATGGTACAACAACAATGGATCTGGTTTACTTAAACAAGAGAGATCTGGAACATGTACTGAAGATGAGTTAAGAAGTTTCAAACTTGCAAAAACTGATCAACAAGTACACCAAAGAAACTCATGTTCTGCTTCACTTTTGAGATCTAATGCTACCACTACACTTTTTTCTTCTGATGGTCAACACCAACAACAACAAATGCTTAGTTTTTCAACTCCAACTTCAAAATCTGAATCTTTTTTAGTTGACAAAACTACCCAAAATGCTGCATTGTCTTATGCTGCTTCTTACCATCCTATGTCTAGTTACAACAGAAATACAGGTTATAGTTCTGGAAGCATGCATGGAGGTTTAAGTGGTGTTAGAGGACCATTCACACCTTCTCAGTGGATGGAGTTGGAACATCAGGCTTTGATCTATAAGTACATCACTGCAAATGTTGCTGTACCTCATCATTTGCTTATACCTATCAGAAAAGCCCTTGATTCTGCTGGCTTATCTAGCTTCTCAACTGCTCTCCTCAGACCAAATGCATTGGGATGGGGAGGATTCCATCTGGGATACTCGAACAACACCGATCCGGAACCAGGAAGGTGTAGGAGAACAGATGGAAAGAAATGGCGATGCTCAAGAGATGCCGTTGTTGATCAAAAGTACTGCGAAAGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCTGGCCAGGCTCTCACCACTGGTGGAACCACAAATACAGCTACTACTACTACTTCAACCATTACTCCAAGTGGTTCATCAAAGCAGATCAATTCTGCTGCTGCTTCTCCTTCTTCATCTATCGTTGTTCCTGGTGGCAACACTGTTTCCAACACTCTTAGCTTTGCACACCAGGAGCATTCCAAGAATATGAACAGCCTTATTGGACAAGATAATGGTTCTTCTGCTGCCAACACCATCAACAGGATGTTCATGAATAACAAAGAGAATAACAACACTAGTGAGACGATGCAGGATGGTCCTGCACTACCGATGCTGCCACCCACTCTAGAGTTGAAACCAAAGGAAAATCAACCTTTCATGATTCAAAAACAGCACATTTCATATGATGAGTCCTCAAGGAACAATGAATTCGGGTTTGTCACTTCCGATTCCCTTCTGAACCCTTCACAGAAAACCTCCACTTTGCTAGGAACCCGAACCTTTGGTTCATCTTCACAGAACCCTACAAACCGAGATGCAGGCTCTCAGCAATCCCTTAGGCATTTTATTGACGACTTTCCCAAACCTCACTCAGATCACCAACATCATAACCGCTCAGGTGGTTTTTCTTGGCCGGAGCTCGACATGCAGTCTGATAGGACACAACTATCAATTTCAACACCGATGACTTCCTCAGACTTCATGTCGTTCACTTCCTCGGCAACCAATGAAAAACTCACACTTTCACCTCTTAGGCTATCAAGAGAAATAGACCCTATTCAAATGGGGTTAGGTGTTGGAAGTAGTGCTCTCAATAACAACAATGAATCATCAAACAATAATACTACAAAGCAAGCTAATTGGATTCCAATAACTTGGGAGAGTTCAATGGGTGGTCCACTTGGAGAGGTTCTTCATCTTAGTAATACTATTACCTACAATGCAAACGATGATCACTATGGCAGCGGCAACAACAATTCGTCCGCCCTAAATCTCATGACTGATGGTTGGGACAATCACAATAGTCCTCCAATGGGATCATCGCCAACCGGAGTCCTTCAAAAGACAGCATTCGGATCGCTTTCAAATAGTAGCGCCGGTAGTAGTCCAAGAGCAGAGAACAATAAAACAACTCAAGAAGGAGCTAGTTTGTGCAATGATCTTCTAGGATCAACTCTTGGTAATAATACTTCCTTTACTCCTTAG 1962 0.4235 MDLGVVSLEGLVSSDPESKNKWYNNNGSGLLKQERSGTCTEDELRSFKLAKTDQQVHQRNSCSASLLRSNATTTLFSSDGQHQQQQMLSFSTPTSKSESFLVDKTTQNAALSYAASYHPMSSYNRNTGYSSGSMHGGLSGVRGPFTPSQWMELEHQALIYKYITANVAVPHHLLIPIRKALDSAGLSSFSTALLRPNALGWGGFHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGQALTTGGTTNTATTTTSTITPSGSSKQINSAAASPSSSIVVPGGNTVSNTLSFAHQEHSKNMNSLIGQDNGSSAANTINRMFMNNKENNNTSETMQDGPALPMLPPTLELKPKENQPFMIQKQHISYDESSRNNEFGFVTSDSLLNPSQKTSTLLGTRTFGSSSQNPTNRDAGSQQSLRHFIDDFPKPHSDHQHHNRSGGFSWPELDMQSDRTQLSISTPMTSSDFMSFTSSATNEKLTLSPLRLSREIDPIQMGLGVGSSALNNNNESSNNNTTKQANWIPITWESSMGGPLGEVLHLSNTITYNANDDHYGSGNNNSSALNLMTDGWDNHNSPPMGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKTTQEGASLCNDLLGSTLGNNTSFTP* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0432 653 MobiDBLite consensus disorder prediction 442 458 - -
Mtr1g0432 653 ProSiteProfiles WRC domain profile. 213 257 IPR014977 -
Mtr1g0432 653 Pfam QLQ 144 178 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr1g0432 653 MobiDBLite consensus disorder prediction 407 436 - -
Mtr1g0432 653 MobiDBLite consensus disorder prediction 583 653 - -
Mtr1g0432 653 Pfam WRC 214 256 IPR014977 -
Mtr1g0432 653 PANTHER GROWTH-REGULATING FACTOR 9 19 631 - -
Mtr1g0432 653 MobiDBLite consensus disorder prediction 407 466 - -
Mtr1g0432 653 ProSiteProfiles QLQ domain profile. 144 179 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr1g0432 653 MobiDBLite consensus disorder prediction 240 301 - -
Mtr1g0432 653 SMART QLQ_2 143 179 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr1g0432 653 MobiDBLite consensus disorder prediction 257 301 - -
Mtr1g0432 653 PANTHER - 19 631 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0432 Mtr-Chr1 4965240 4969699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0432 1 611 GRF Transcription Factor Family AT2G22840 39.013 2.89e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mtr1g0432 WRC 6.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0432 - - cam:101496763 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0432 1 4965240 4969699 Mtr1g0432 1 4965240 4969699 ECH