Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0430 ATGAAGTCCATGATGAATGATAGTAACATTAGTGATGATGGAAACAATCATAACTGGTTAGGATTCTCTCTCTCACCCTACCACATGAAAATGGAGCTTACTTCTTCTGACCCTTCTCAACATCATCATCCTAGTCATCACTACTATCATCATCATCATGATAACCAACCTTCCTCTTCTGTTGTTCCCTCTAACTTTTACTTGATGTCACCTTCACACCTTAACATGAACAATACTTCTTCATTATGTTATGGTCTTGGAGAAAACAACAATTCTTTTCATTCTTCTTTACCTATGATGCCTCTTAAATCTGATGGATCACTTTGCATCATGGAAGAAGCTCTTACTAGATCACAATCTCAAGTGATGATGCCAACTTCATCTCCAAAACTAGAAGACTTCCTTGGTGGTGCAACTATGGGAACTCACAATCATGAATATGAAGGACATGAAAGAGAAACAATGGCTTTGTTAAGCTTGGACAGCATCTACTATAACAACAATGCAGACCATGAAACCAATAGAGAACATTCTTCTCTTGACCATTCATCATACTTTTCAGGTTTTTCTTGTCATGGAATGTATCAAAATCCATTAATGGAAGAAGAACAAACTAAGGAAGAAAGTATTTATAGCTTCAAAAACTTTGTGGCTCCTAGAGATTATTCTATGGAGCAACATCATCATCAAGTGAATAATAGTGTTGGTAGTATTGGAGATGATGGTTCTGTTGGAACAGTTAATGGTTGTGGAGAGTTACAGACTCTAAGCCTTTCTATGAGTCCTGGTTCTCAATCAAGTTGTGTTACTGTTCCAAATCAGATTTCAGCTTCTGGAACTGATTCAGTAGTTGTTGAAGCTAAAAAGAGAGGACATGCTAAGGTTGGACAGAAGCAACCTGCTCATAGGAAAACTATTAGCACATTTGGTCAAAGAACTTCTCAGTATAGAGGAGTGACAAGGCATAGATGGACCGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGTTTATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCTTGCTGCTCTCAAATATTGGGGACCTTCAACGCATATAAACTTCTCGATTGAAATTTACCAAAATGAACTTGAAGAAATGAATAACATGAATAGGCAGGAATATGTTGCTCATTTGAGAAGAAAGAGTAGTGGTTTTTCAAGGGGTGCTTCAATGTATAGAGGGGTGACAAGACACCACCAGCATGGTAGATGGCAAGCAAGGATAGGCAGAGTAGCTGGAAATAGGGACCTTTATCTTGGGACATTTAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCCGCAATCAAATTCCGCGGCCTAAATGCAGTGACAAACTTTGACATGTCCAAATACAATGTTGAAAAAATCATGTCCAGCAACACCTTGCTTGCTGGTGAACAAGCTAGAAGAACAAAGAAGAGTAAAGAGAGTAATGAAAAAACTGAGGCCAACGAGTGTAACAACAATGTTGTATCAAGTCCAATCATACATAGTCAAGAAGTTGAAGCTGTGACCAACAATGAAAATAATTGGAATCAGTCCCCACAACAAGAGTCAAATACATGTGACCAAAAATTAATTAGAAATTCTGATTTCTCAATGTCCCTACAAGATATCATTGGGATTGATTCAGTAGGAGGATCTAGCCAAGTTATGGTAGATGATTCTTCCAACAAGATGATAAGGACTCATTTTTCAAATTCATCTTCACTTGTGACTAGTTTAAGTAGCTCAAGAGAATGCAGCCCTGACAACAAAAGTACTGGCCCCACAATGCTTTTTCCAAAACCTCCAACAGGGTCAAAAACTTTGAGTCCTATTGCTACTAATGCTGGATCTTGGTTTCCCTCAGCTAGTGCTATCTCAATGTCCCATTTTCCGGTTTTCGCGGCTTGGAGTGATGCTTAG 1992 0.3876 MKSMMNDSNISDDGNNHNWLGFSLSPYHMKMELTSSDPSQHHHPSHHYYHHHHDNQPSSSVVPSNFYLMSPSHLNMNNTSSLCYGLGENNNSFHSSLPMMPLKSDGSLCIMEEALTRSQSQVMMPTSSPKLEDFLGGATMGTHNHEYEGHERETMALLSLDSIYYNNNADHETNREHSSLDHSSYFSGFSCHGMYQNPLMEEEQTKEESIYSFKNFVAPRDYSMEQHHHQVNNSVGSIGDDGSVGTVNGCGELQTLSLSMSPGSQSSCVTVPNQISASGTDSVVVEAKKRGHAKVGQKQPAHRKTISTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIEIYQNELEEMNNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNRDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDMSKYNVEKIMSSNTLLAGEQARRTKKSKESNEKTEANECNNNVVSSPIIHSQEVEAVTNNENNWNQSPQQESNTCDQKLIRNSDFSMSLQDIIGIDSVGGSSQVMVDDSSNKMIRTHFSNSSSLVTSLSSSRECSPDNKSTGPTMLFPKPPTGSKTLSPIATNAGSWFPSASAISMSHFPVFAAWSDA* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0430 663 MobiDBLite consensus disorder prediction 33 62 - -
Mtr1g0430 663 SUPERFAMILY DNA-binding domain 314 383 IPR016177 GO:0003677
Mtr1g0430 663 PRINTS Ethylene responsive element binding protein signature 316 327 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 PRINTS Ethylene responsive element binding protein signature 457 477 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 ProSiteProfiles AP2/ERF domain profile. 315 381 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 MobiDBLite consensus disorder prediction 492 512 - -
Mtr1g0430 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 660 - -
Mtr1g0430 663 CDD AP2 416 477 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 660 - -
Mtr1g0430 663 SUPERFAMILY DNA-binding domain 416 477 IPR016177 GO:0003677
Mtr1g0430 663 MobiDBLite consensus disorder prediction 603 633 - -
Mtr1g0430 663 CDD AP2 314 380 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 MobiDBLite consensus disorder prediction 496 510 - -
Mtr1g0430 663 ProSiteProfiles AP2/ERF domain profile. 417 475 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 SMART rav1_2 315 387 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 SMART rav1_2 417 481 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 MobiDBLite consensus disorder prediction 603 622 - -
Mtr1g0430 663 Gene3D AP2/ERF domain 417 477 IPR036955 GO:0003700|GO:0006355
Mtr1g0430 663 Gene3D AP2/ERF domain 314 383 IPR036955 GO:0003700|GO:0006355
Mtr1g0430 663 Pfam AP2 domain 418 467 IPR001471 GO:0003700|GO:0006355
Mtr1g0430 663 Pfam AP2 domain 315 373 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0430 Mtr-Chr1 4909144 4913676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0430 12 522 AP2-EREBP Transcription Factor Family AT4G37750 52.174 6.41e-152 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mtr1g0430 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0430 K09285 - gmx:100798179 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0430 1 4909144 4913676 Mtr1g0430 1 4909144 4913676 ECH
Mtr1g0430 1 4909144 4913676 Mtr3g3738 3 51204339 51208205 PCT