Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0423 ATGAAGGAAGATGAAGAAGGTGATGATAGGAAAATCAACGAAGAGAAAGTTCAAGAATTCAAGCTTTGGGGAATTTTTCTCTTTGGCTTAATTGGTGCTACCGCCACCACCTTCGCCTTGTCTAGGTCGAAAGGTGGTTCTTTTCGATCAGCTTTTCAAGAAGAAGCATGGAAGAGGTACAATAAGCGATTGCAAGAGGAATACGAGGAAGAGGCTGAGAGAGTGGAAAGAATAAGGCAAATGCAAAGTGTGTTTAATAGAGAAAGGGAGAAGACGTTTAGAAGAAAATACGAGAATTGGAAGGAAAATGGTTCTGGCACAAATCCTCAGCATTTCCAAAGAGATGATTGGTATTCGAAAGCTGAACAAACCTTTAGAGACCAATGGAAAAATTACCAAGACACCCCAAGGGAAAATGGAAGCATAAATTATTCATTAACACACCACTACACGGTTTTGGGTCTTGACAGGTCTAGAACAACACCTTATACAGATGCTGAAATAAAGACAGCGTTTAGGACGAAGGCAATGCAGTATCATCCTGATCAGAACCAGGAGAATAAAGAGGCTGCTGAAGCTAAGTTCAAAGAAGTAATGGATTCATATGAGGCCATACAACAAGAAAGAAAGAATCATAGTCTGTAA 645 0.4 MKEDEEGDDRKINEEKVQEFKLWGIFLFGLIGATATTFALSRSKGGSFRSAFQEEAWKRYNKRLQEEYEEEAERVERIRQMQSVFNREREKTFRRKYENWKENGSGTNPQHFQRDDWYSKAEQTFRDQWKNYQDTPRENGSINYSLTHHYTVLGLDRSRTTPYTDAEIKTAFRTKAMQYHPDQNQENKEAAEAKFKEVMDSYEAIQQERKNHSL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0423 214 PRINTS DnaJ domain signature 150 168 IPR001623 -
Mtr1g0423 214 PRINTS DnaJ domain signature 172 187 IPR001623 -
Mtr1g0423 214 PRINTS DnaJ domain signature 190 210 IPR001623 -
Mtr1g0423 214 SMART dnaj_3 147 210 IPR001623 -
Mtr1g0423 214 Pfam DnaJ domain 149 210 IPR001623 -
Mtr1g0423 214 SUPERFAMILY Chaperone J-domain 145 210 IPR036869 -
Mtr1g0423 214 Coils Coil 188 208 - -
Mtr1g0423 214 Coils Coil 54 81 - -
Mtr1g0423 214 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 4 214 - -
Mtr1g0423 214 Gene3D DnaJ domain 135 214 IPR036869 -
Mtr1g0423 214 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 214 - -
Mtr1g0423 214 CDD DnaJ 149 203 IPR001623 -
Mtr1g0423 214 ProSiteProfiles dnaJ domain profile. 148 210 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0423 Mtr-Chr1 4823117 4827159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0423 149 213 Miscellaneous Gene Families AT5G49580 41.538 1.57e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0423 - - gmx:100804936 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0423 1 4823117 4827159 Mtr1g0423 1 4823117 4827159 ECH
Mtr1g0423 1 4823117 4827159 Mtr3g3742 3 51247953 51250918 PCT