Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0420 ATGGACATTGTTGCTCTTTTAACTTCTGCTGGAATTAATATCGCTGTGTGTGTGGTGATCTTTTCACTATATTCGATACTAAGAAAACAGCCCAGCAATGTTAATGTGTACTTTGCACGGAGACTAGCATCTCAGTATTCTAGACAGGTTGATTTCTGGCTGGAAAGATTTGTTCCCTCTCCTGGCTGGATATTAAAAGCATGGGAAACATCTGAGAATGAGATATTGGCTATTGGTGGCCTGGATGCTGTAGTTTTTGTAAGGATAGTCGTTTTCAGTATTCGAGTTTTTTCCATCACTGGTGTCATCTGCACTGTTCTAGTGCTTCCTGTGAATTATTACGGTAAAGACAGACTACATAAGCATATACCTTTGGAGTCACTGGATGTATTTACCATTGAGAATGTCGAAGAAGGTTCAAAATGGCTTTGGGCTCATTGTCTTGCATTATACATCATAACACTTGCAGCTTGCACTCTCCTTTACTTTGAATACAAGAGCATTACTAAGTTGAGGCTACTACATATTACTGGATCTCCTCCAAGTCTAAGTCATTTTACTATTCTTGTCCGATCAATTCCCTGGTCTATAAGCGAATCATACTGTGATACAGTGAACAAATTCTTCTCACAGTACCATGCATCAACCTATCTGTCTCACCAAATGATTTATAAGTGTGGCAAAGTTCAGAAACTGAAGGACGGGGCTGAACATATGTGCAAGGTACTTAAAGATTCATCGGAAAATAGTTGTAAGCCAGGTGTTGTGCCATGTTGCTGTTTGGGAAATTCCACAGATTCTTTCAAGATGGTTTCTAATGAGATGGGTAGTATTCATGAGAGAACATGCTACACTGACATAGATACAAGGAAAAGGGAATTCCCAGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCACAGACTCTACAAACATCAAATCCTATGTTATGGGCGACAGACATGGCTCCTGAACCACACGATGTTCACTGGTCCAACATTCGTGTACCATATAGGCAAATTTGGATCCGTAAGATGGCTACATTTTCGGCTACGATTGCCTTCATGCTTGTGTTCATTGTCCCAGTTGGGTTGGTACAAGGCTTGACTCAACTAGAAAAACTTCAGAAAATGTTCCCTTTTCTGGCAGGGGTACTTAAAAACCAATATGTGAGGCGGGTGGTGACTGGTTACCTACCAAGTGTGATATTGGTTTTATTTTTGTGTTTTGTTCCACCATTGATGATGCTATTTTCAACAGTTGAGGGTCCTATTTCCCGCAGTGGAAGGAAGAAAAGTGCATGTTGGAAAGTTTTGTACTTCACAATCTGGAATGTGTTTTTTATTAATGTTTTAACTGGTTCTCTTATAAGTCAACTTTCAGTCTTTTCTAGCTTAAAAGAGCTGCCTGCAACACTTGCAAAGGCAGTGCCAGCTCAGGGTACCTTCTTCACGACTTACATTTTGTCATCTGGTTGGGCAAGTCTGGGATTTGAACTTCTGCAAGTTTGTCCTCTTTTATACAATCTATTCCAGAGATTCCTACTCAGGGTTAAGGATGATACACTTAATGGCATAACTTTTCCATACCATACAGAAGTTCCTAGGCTATTACTGTTTGGATTTCTTGGGTTCACCTGTTCTATTCTGGCACCTCTAATGCTTCCCTTCTTATTGATCTACTTTTTCCTTGCTTATCTTGTTTACCGAAACCAGATTATCAACGTGTACATTACAAAATACGATAGTGGGGGACAATATTGGCCTATTGCACACAACGCAACGGTTTGCTCTTTGCTATTTGCTCAACTTATCGCGCTTGGGGTTTTTGGACTAAAACGCTCCACAGTTTCAGCTGGATTTATTGCTCCCTTGCTCATTGTTACCATTCTTTTTCACCAGTATTGTAGGAAACGATTTCTCCCAGTATTTAGAAGCAATTCAGCACAGATTCTTATTGACTTGGATAAGAAAGATGAACAATGTGGAAGGATGGAAGAGATTTATGAACAATTGCGTTCGGCCTACAAACAACCCATGCCGCATGCCCCAAGCCCATCCGAATGCTCCAGCCCGCTAGAGGACAAGGGGATTGCTGGGACTTCAGAAGATATCGAGAAAGGCGTAGTCATTAAACAGACTAGACCAGGACCTATCCATCGCACTCTGAGTCCGGCTTTGGATATATCGGTACTTGGTGGAAATCAAGTGAGCGATCCTGCTTGTACATTGAATAAGAATATTCCTGATGTGCCCGATCCAGTGCATGAACATCTAATTAAAGATGGATTATGA 2307 0.4096 MDIVALLTSAGINIAVCVVIFSLYSILRKQPSNVNVYFARRLASQYSRQVDFWLERFVPSPGWILKAWETSENEILAIGGLDAVVFVRIVVFSIRVFSITGVICTVLVLPVNYYGKDRLHKHIPLESLDVFTIENVEEGSKWLWAHCLALYIITLAACTLLYFEYKSITKLRLLHITGSPPSLSHFTILVRSIPWSISESYCDTVNKFFSQYHASTYLSHQMIYKCGKVQKLKDGAEHMCKVLKDSSENSCKPGVVPCCCLGNSTDSFKMVSNEMGSIHERTCYTDIDTRKREFPAAFVFFKSRYAALMAAQTLQTSNPMLWATDMAPEPHDVHWSNIRVPYRQIWIRKMATFSATIAFMLVFIVPVGLVQGLTQLEKLQKMFPFLAGVLKNQYVRRVVTGYLPSVILVLFLCFVPPLMMLFSTVEGPISRSGRKKSACWKVLYFTIWNVFFINVLTGSLISQLSVFSSLKELPATLAKAVPAQGTFFTTYILSSGWASLGFELLQVCPLLYNLFQRFLLRVKDDTLNGITFPYHTEVPRLLLFGFLGFTCSILAPLMLPFLLIYFFLAYLVYRNQIINVYITKYDSGGQYWPIAHNATVCSLLFAQLIALGVFGLKRSTVSAGFIAPLLIVTILFHQYCRKRFLPVFRSNSAQILIDLDKKDEQCGRMEEIYEQLRSAYKQPMPHAPSPSECSSPLEDKGIAGTSEDIEKGVVIKQTRPGPIHRTLSPALDISVLGGNQVSDPACTLNKNIPDVPDPVHEHLIKDGL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0420 768 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 752 IPR045122 GO:0005227
Mtr1g0420 768 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Mtr1g0420 768 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 337 IPR027815 -
Mtr1g0420 768 Coils Coil 659 679 - -
Mtr1g0420 768 Pfam Calcium-dependent channel, 7TM region, putative phosphate 348 614 IPR003864 GO:0016020
Mtr1g0420 768 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0420 Mtr-Chr1 4764696 4774312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0420 K21989 - gmx:100796574 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0420 1 4764696 4774312 Mtr1g0420 1 4764696 4774312 ECH
Mtr1g0420 1 4764696 4774312 Mtr3g3746 3 51284295 51294674 PCT