Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0415 ATGAAGAGATTCTTCACAAGCTGTGTCTCAAAGTTTCACTCCCACTCGAAACATAAGAAATCTCACTCTCACTCTCAGATAATGGCAGGAAACATCTCTGGTCCAAGTGTGAGCAATGCTGCTAATATTTTGCTGAATCATGACTTCTCAAATGACCTGAACTCTTGGCATCTCAATTGCTGCAATGGCTATGTAATTTCGTCCAAAGCAGGTGGTCAAGGTGTAAATTTGATGGATTCGGATTGTAATTATGCTGTTATCACCGACCGAAACGAAGGCTGGCAAGGTCTTGAGCAAGATATCACAGACAGAATTTCCATTGGTTCTGCTTACACGGTTTCGGCTTTTGTTGGAGTATCCGGCCTTTCTCAGGAATCTGTTGATGTGAAAGCTACACTGAAACTAGAATATCATGATTCAGCTACAAATTATTTGTTCATTGGAAGATCTTCTGTTATGAAGGGTAGCTGGGAAAAGTTAGAAGGAACATTTTCACTGTCCACTAAACCCGATCGGGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAATTGACTTGCTTATAAGATCAGTAGAGATCAACTGTTCCATTCCAAATGACAATAAGTTCATAAGTACAGAAGCATGTGTTTCTACTGGAGATGAAAGCATCATAATAAACCCACAATTTGAGGATGGCCTGAATAATTGGTCTGGAAGGAGCTGCAAGATTGTGTTGCATGATTCCATGGCAGATGGTAAAATTGTTCCAAAGTCTGGGAAATATTTTGCATGCGCAACAGAACGAACACAGTTCTGGAATGGAATTCAGCAGGAGATAACTGGACGTGTGCAGCGCAAGTTGGCCTATGAGATCACTGCTTTAGTTCGAATATATGGCAACAATGTCACTAATGCCGATGTACGAGCTACTTTGTGGGTTCAAACACCAGACCTCCGAGAGCAGTATATAGGCATTGCAAATGTGCAGGCAACCGATACAGATTGGGTGACGCTGCAGGGAAAATTCCTTCTAAATGGTCCCACATCCAAAGCGGTCCTTTATTTAGAGGGACCTCCTTCTGGCACCGACATTCTTGTTAATACTTTGGTTGTAAAGCATGCTGCTAAAACACCTCCTTCAACACCACCAGCTGCACAGAATGTTGCTTTTGGAGTTAATATAATTGAGAACAGCAATCTTTCTGATGACACAAAAGGCTGGTTTACCCTTGGTAATTGCCCTTTAACTGTTAAAACCGGTTCTCCTCATATACTTCCACCAATGGCAAGAGAATCTCTTGGACCTCACGGAATCCTAAGTGGCCGCTACATACTTGTAACTAATAGGACTCAAACTTGGATGGGTCCTGCTCAGGTGATCACCGAGAAATTAAAGCTATTTTTGACTTATCAAGTATCTGCTTGGGTCCGGATTGGTTCCAGTTCAAATGGACCACAGAATGTGAATGTTGCCCTTGGTGCTGACAATCAGTGGATCAATGGAGGACAAACCGAGGTTTCGGATGATAGATGGCATGAAATTGGTGGATCCTTTAGAATTGAAAAGCAGCCAACAAAGATTATGGTTTATATCCAAGGTCCAGCTTCTGGTGTAGACTTAATGGTTGCCGGACTTCAAATTTTCCCTGTTGATAGACATGCAAGATTTAGATATTTAAAGATGCAGACAGACAAGATTCGGAAGCGCGATGTTGTCCTGAAATTTGCCGGACTAGACTCTAGCAGCTACCTTAACACCATGGTGCAAGTTAGACAAACACAAAACAATTTCCCGATTGGAACATGCATCAGCAGATCAAACATCGACAATGAAGATTTTGTCAACTTCCTTGTGAAACACTTCAACTGGGCTGTGTTTGCAAATGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATTTGAATTACAAAGACGCTGATGATCTTTTAACCTTGTGTCAGAAGTACAAGATCCAAACTCGTGGACACTGCATCTTTTGGGAAGTGGATGGAACCGTTCAACAATGGGTCAAGTCGCTGAATAAAAACGATCTGATGACGGCCGTTCAAAACCGCTTAACCAGTCTTCTAACTCGCTACAAAGGTAAGTTTAGTCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGATAGATTAGGCAAAGATATAAGGGCAAACATGTTCAAGACTGCAAACCAACTAGATCTGTCCGCTACATTGTTTGTGAATGATTATCATATTGAAGATGGATGTGATACAAGATCGTGTCCAAATAAATACATTGAACACATTCTTGATTTGCAAGAACAAGGTGCACCTGTTGGTGGAATTGGAATTCAAGGACACATAGATAGTCCAGTTGGGCCTGTTGTTTGTTCTTCACTTGATAAATTAGGTATTCTTGGTTTACCGATATGGTTTACAGAACTTGATGTGTCTTCTATGAATGAATATGTGAGAGGTGATGATCTTGAAGTTATGCTTAGGGAAGCCATGGCTCACCCTGCTGTTGAAGGGATAATGTTGTGGGGATTCTGGGAGTTGTTTATGAGTAGGGATAATGCACATTTGGTGAATGCAGAAGGTGATATTAATGAAGCTGGAAAAAGGTTTCTAGCTTTGAAACAAGAGTGGCTATCTCATAGTCATGGTCATGTTAATGAACAAGGTCAATTCAACTTTAGAGGATTTTATGGAACATATAATGTGGAAATTGTGACACCATCAAAGAAAATTTCTAAGACATTTGTGCTTGATAAAGGTGATTCCCCAATGGAGGTGTCAATTGATTTATAA 2793 0.4082 MKRFFTSCVSKFHSHSKHKKSHSHSQIMAGNISGPSVSNAANILLNHDFSNDLNSWHLNCCNGYVISSKAGGQGVNLMDSDCNYAVITDRNEGWQGLEQDITDRISIGSAYTVSAFVGVSGLSQESVDVKATLKLEYHDSATNYLFIGRSSVMKGSWEKLEGTFSLSTKPDRVVFYLEGPAPGIDLLIRSVEINCSIPNDNKFISTEACVSTGDESIIINPQFEDGLNNWSGRSCKIVLHDSMADGKIVPKSGKYFACATERTQFWNGIQQEITGRVQRKLAYEITALVRIYGNNVTNADVRATLWVQTPDLREQYIGIANVQATDTDWVTLQGKFLLNGPTSKAVLYLEGPPSGTDILVNTLVVKHAAKTPPSTPPAAQNVAFGVNIIENSNLSDDTKGWFTLGNCPLTVKTGSPHILPPMARESLGPHGILSGRYILVTNRTQTWMGPAQVITEKLKLFLTYQVSAWVRIGSSSNGPQNVNVALGADNQWINGGQTEVSDDRWHEIGGSFRIEKQPTKIMVYIQGPASGVDLMVAGLQIFPVDRHARFRYLKMQTDKIRKRDVVLKFAGLDSSSYLNTMVQVRQTQNNFPIGTCISRSNIDNEDFVNFLVKHFNWAVFANELKWYWTEPQQGNLNYKDADDLLTLCQKYKIQTRGHCIFWEVDGTVQQWVKSLNKNDLMTAVQNRLTSLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDLSATLFVNDYHIEDGCDTRSCPNKYIEHILDLQEQGAPVGGIGIQGHIDSPVGPVVCSSLDKLGILGLPIWFTELDVSSMNEYVRGDDLEVMLREAMAHPAVEGIMLWGFWELFMSRDNAHLVNAEGDINEAGKRFLALKQEWLSHSHGHVNEQGQFNFRGFYGTYNVEIVTPSKKISKTFVLDKGDSPMEVSIDL* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0415 930 SUPERFAMILY (Trans)glycosidases 579 881 IPR017853 -
Mtr1g0415 930 PANTHER - 41 191 - -
Mtr1g0415 930 PANTHER - 204 930 - -
Mtr1g0415 930 SUPERFAMILY Galactose-binding domain-like 385 545 IPR008979 -
Mtr1g0415 930 Pfam Glycosyl hydrolase family 10 587 844 IPR001000 GO:0004553|GO:0005975
Mtr1g0415 930 Gene3D Glycosidases 576 886 - -
Mtr1g0415 930 Gene3D - 210 368 - -
Mtr1g0415 930 Gene3D - 383 542 - -
Mtr1g0415 930 Gene3D - 36 195 - -
Mtr1g0415 930 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 578 873 IPR001000 GO:0004553|GO:0005975
Mtr1g0415 930 Pfam Carbohydrate binding domain 41 182 IPR003305 GO:0016798
Mtr1g0415 930 Pfam Carbohydrate binding domain 387 530 IPR003305 GO:0016798
Mtr1g0415 930 Pfam Carbohydrate binding domain 216 353 IPR003305 GO:0016798
Mtr1g0415 930 PANTHER GLYCOSYL HYDROLASE 204 930 IPR044846 GO:0004553|GO:0005975
Mtr1g0415 930 PANTHER GLYCOSYL HYDROLASE 41 191 IPR044846 GO:0004553|GO:0005975
Mtr1g0415 930 SUPERFAMILY Galactose-binding domain-like 41 194 IPR008979 -
Mtr1g0415 930 SMART glyco_10 624 874 IPR001000 GO:0004553|GO:0005975
Mtr1g0415 930 SUPERFAMILY Galactose-binding domain-like 215 368 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0415 Mtr-Chr1 4680482 4685962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0415 1 930 Glycoside Hydrolase AT1G58370 66.878 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0415 - - lja:Lj0g3v0316669.1 1602.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0415 1 4680482 4685962 Mtr1g0415 1 4680482 4685962 ECH
Mtr1g0415 1 4680482 4685962 Mtr3g3750 3 51337500 51341639 PCT