Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0414 ATGGGAAGAGCTCCTTGTTGTGACAAAGAAAAAGTTAAGAGAGGACCATGGTCTCCTGATGAAGATGCAACACTCAAGAGTTATCTTGCAACTCATGGCACTGTTGGAAATTGGATTGCATTGCCCAAAAAAGCTGGACTTAAGAGGTGTGGGAAGAGTTGCCGTCTAAGGTGGCTGAATTATCTGAGGCCAGACATCAAACATGGAGGCTTCACTGAAGAAGAGGATGCCATCATTTTCACCCTCTATTCTCAAATGGGTAGCAGATGGTCTGCCATAGCATCTAAACTACCTGGCAGAACAGACAATGATGTGAAAAACTATTGGAACACAAAACTGAAGAAGAAGATTTTGACAGGAATAGTTAAGCTCAAACCAATGACTGAAAATGACAATACTATCCCTTCAACTCCATCACTAACTCAAAGTTCCAACCCTCAAAATTCAGAAATCAATTTCCCTGCTTCACAAAATCAGCATTCTCCACCTTCACCACTGCCAAATATGCTAGACAATAAAGTTGACAAAATTCATGATGCTGTAGTATCAGAAATTGGTACAAGTAACAAAAGTATTATTAACCCTTTGGTGTCAATTTCTCAAGACTCTTCAAGCATTGCAATTCAAGATCAAGCTGGTGATGAATCTATGGAATCATTCATGGATTTTGGATTTGGATTTCCTCATGATGATGTCAATGATCTTAACTGCTTTCCTGAGTGGGTTGATTTTAGTTATGCCGACATTAAGCCAAACTGA 759 0.3939 MGRAPCCDKEKVKRGPWSPDEDATLKSYLATHGTVGNWIALPKKAGLKRCGKSCRLRWLNYLRPDIKHGGFTEEEDAIIFTLYSQMGSRWSAIASKLPGRTDNDVKNYWNTKLKKKILTGIVKLKPMTENDNTIPSTPSLTQSSNPQNSEINFPASQNQHSPPSPLPNMLDNKVDKIHDAVVSEIGTSNKSIINPLVSISQDSSSIAIQDQAGDESMESFMDFGFGFPHDDVNDLNCFPEWVDFSYADIKPN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0414 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mtr1g0414 252 CDD SANT 71 113 IPR001005 -
Mtr1g0414 252 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mtr1g0414 252 Gene3D - 70 150 - -
Mtr1g0414 252 Gene3D - 6 68 - -
Mtr1g0414 252 PANTHER OS09G0431300 PROTEIN 1 172 - -
Mtr1g0414 252 CDD SANT 16 62 IPR001005 -
Mtr1g0414 252 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mtr1g0414 252 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mtr1g0414 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mtr1g0414 252 PANTHER OS09G0431300 PROTEIN 1 172 - -
Mtr1g0414 252 MobiDBLite consensus disorder prediction 129 166 - -
Mtr1g0414 252 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mtr1g0414 252 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mtr1g0414 252 SMART sant 13 64 IPR001005 -
Mtr1g0414 252 SMART sant 67 115 IPR001005 -
Mtr1g0414 252 MobiDBLite consensus disorder prediction 128 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0414 Mtr-Chr1 4670817 4673789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0414 1 137 MYB Transcription Factor Family AT5G57620 70.073 1.99e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr1g0414 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0414 K09422 - gmx:100789985 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0414 1 4670817 4673789 Mtr1g0414 1 4670817 4673789 ECH