Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0413 ATGGATTTCATGAAAGTCTTCGATCAAACCGTTCGAGAAATTAAGAGAGAGGTGAATCTGAAGGTGCTTAAGGTTCCTGAAATCGAACAGAAGGTGTTGGATGCAACTGACGATGAGCCTTGGGGTCCTCATGGTACTGTGCTGGCAGAGATTGCAACTGCTACCAAAAAATTTACTGAATGTCAGCTGGTTATGAATGTTCTTTGGACAAGATTGGCTGAAACTGGAAAGGATTGGCGATATGTATACAAGGCATTAGCTGTTATAGAGTATTTGGTATCACATGGATCTGAACGTGCAGTTGACGACATTATAGAACATACTTTTCAGATCTCTGCACTTTCTAGCTTTGAATATGTTGAGCCTAATGGGAAGGATGTGGGACTCAATGTAAGGAAGAAGGCAGAAAACATTGTTGCCCTTTTGAATGATAGAGAAAAGATACATGATATTAGAAATAAAGCTGCTGCAAACCGTGACAAGTACGTTGGAGTTTCATCTAGTGGAATGACATACAAATCCGGGACAACCTCATTTAGTAGTGGGAGCAGTAACAAATATGGAGGTTTTGGTTCAAGTGGTGATAGGTTTAGTGATAGCTACGGAGACAAGGGGCGCTATGATGAAGCAAAAATAGACAAAGATTACTCAGGAAAATCACGGCATGGTGTCTCAAGTAAAAATGAAGAGAACTCCTTCAAAAAAGGTTCTGTTCGGTCTGTCAGCAAAAGTCAGGAGAACAAATCTTCTAGAGCATCAAAGTCATCTGCTAATGCAGTTCCTTCTCAAAGTGCAAGTGTACCTACTGAGGACGACTTTGATGATTTTGATCCGAGAGGAACATCTAGTAAGACTTCAGCTGGAAGCTCAAACCAGGTTGATCTCTTTGGACAAGATTTGCTCGGTGACTTCATGGATGCTCCAACATCTGTTTCTGTAGAAAAGCCAGCAACTAGTAATGTGTCAGATGTTGATCTCTTTGCGGATGCATCATTTGTTTCAGCAGCACCACATGCGGACAAAGGAGCTAGTTCTCAACCACAGGATGAAGTGGATCTTTTCTCTTCACAACCAGCCATTCCTTCAGTTACACCAACAGTTGACTTGTTTTCCATTCCTTCACCAGCTGTGCAGCCTGACAGCAAGTCGGAAAACTCTGTTCCTGTGAATAACAGCACTTTTGATCCCTTTGCTTCTGTTCCACTTAATAATTTTGAGGGATCTGATGTTTTTGGTGATTTTACTTCTCAATCTGATTCTGTATCTTCTCAGCCCTCAACGAATGCTGCCACCGATGGTAGTACAAGTGGTAAATCTGTAACAGACTCTAATGTTTCGCCTAAAAAGGATGCTTTTCAGGTGAAGTCTGGCATTTGGGCTGATTCACTAAGCCGTGGATTGATTGACCTCAATATATCTGCTCCCAAAAAAGTATCCCTTGTCGATGTTGGAATTGTGGGTGGATTAAGTGATGGATTAGATGAAAGGGAGAAAGGCCCTCCAACTACATTATACATGGGGAGAGCTATGGGTACAGGATCCGGTCTTGGTATGTATGGTGGCACTCCTTCACAGTCAACAGCTGGAGATGACATATTTTCAAACTTCGGTGGCCAAAACTATCAATTTGGTGGGTTCCAGAAGTAA 1647 0.4208 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTVLAEIATATKKFTECQLVMNVLWTRLAETGKDWRYVYKALAVIEYLVSHGSERAVDDIIEHTFQISALSSFEYVEPNGKDVGLNVRKKAENIVALLNDREKIHDIRNKAAANRDKYVGVSSSGMTYKSGTTSFSSGSSNKYGGFGSSGDRFSDSYGDKGRYDEAKIDKDYSGKSRHGVSSKNEENSFKKGSVRSVSKSQENKSSRASKSSANAVPSQSASVPTEDDFDDFDPRGTSSKTSAGSSNQVDLFGQDLLGDFMDAPTSVSVEKPATSNVSDVDLFADASFVSAAPHADKGASSQPQDEVDLFSSQPAIPSVTPTVDLFSIPSPAVQPDSKSENSVPVNNSTFDPFASVPLNNFEGSDVFGDFTSQSDSVSSQPSTNAATDGSTSGKSVTDSNVSPKKDAFQVKSGIWADSLSRGLIDLNISAPKKVSLVDVGIVGGLSDGLDEREKGPPTTLYMGRAMGTGSGLGMYGGTPSQSTAGDDIFSNFGGQNYQFGGFQK* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0413 548 Pfam ENTH domain 27 147 IPR013809 -
Mtr1g0413 548 MobiDBLite consensus disorder prediction 365 390 - -
Mtr1g0413 548 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Mtr1g0413 548 SMART enth_2 26 152 IPR013809 -
Mtr1g0413 548 MobiDBLite consensus disorder prediction 212 293 - -
Mtr1g0413 548 MobiDBLite consensus disorder prediction 416 446 - -
Mtr1g0413 548 MobiDBLite consensus disorder prediction 237 269 - -
Mtr1g0413 548 MobiDBLite consensus disorder prediction 212 236 - -
Mtr1g0413 548 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 539 IPR033521 GO:0006623|GO:0030276
Mtr1g0413 548 SUPERFAMILY ENTH/VHS domain 24 165 IPR008942 -
Mtr1g0413 548 CDD ENTH 28 144 - -
Mtr1g0413 548 PANTHER EPSIN/ENT-RELATED 1 539 - -
Mtr1g0413 548 Gene3D - 19 165 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0413 Mtr-Chr1 4646707 4653186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0413 K12471 - gmx:100809198 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0413 1 4646707 4653186 Mtr1g0413 1 4646707 4653186 ECH