Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0411 ATGAAGAGAGGAAAGGGTGGTGATGATGAGAAAGTGGGACCCATGTTCCCAAGGCTCCATGTGAATGACACAACTGAGAAAGGAGGACCAAGAGCTCCACCCAGGAATAAGATGGCACTTTATGAACAGTTTAGTGTTCCTTTTCAAAGACTCAACCCAAATTCACATTCATCTTCTTCTAATTCAATTCCTCTAACATCTTCATCCACCATGGGAAATGACCTTGAGAGAAGCAACATCTTCCCAGTTCGCTTACCTTCACAAGCGGACGCACATCGAGCTAAAAGTTATATTTCTCACCAATCTAATGGAGCAAACTTGGATACTTTGTCAACCCAACTTGAACAGGGAAAAAAAGTAGATGGAGATGACAGTCGTGCATATGATCACTCAAGGATTGGTCAATCTAATCATAAAATGACGAACAGTTTCAATGGGGAAAAAATCACTCTTGTAATTCCAAGTAGACAAAACACAGTAATATCTGTCAAAAGTGCATTGACAGGAGAAATTATTGACAGTCGAGTGAGGCAAGGTAAGAAGATTCCGGATGAAGAGGATCAAGAATGTTCTGTGTCAAATATAAACAGGTTTCCTCAGGGTGATTCTTGTACACGACAGGAATCCAATGACATTGAACATAGCGATGGCCTCCTTGACACCGCAATGGATATGGATAACAGAAACAGCTTTCATTCTACAGTAGACCGAACCATGGTACTTGAAGCTGCCAATGATACCGAGTATCATGATGCCAACATTGACAGCCCAATTCAGAAGGGAAACTCAGAAGGAAGTGGCGATCTTTCCAATATTTCGACTATAGAAAATTTGTCAAGCCTGAAACTTTCTCCTGATGGTGTCGTGCAGATATTAGGTCAACAACTTTTTTGGAAAGCAAGACGAAAAATTACCAATCAGCAGAGAGCGTTTGCGGTCCAAGTGTTTGAATTGCACAGACTGATAAAGGTCCAACATCTGATTGCTGGATCATCAAATCTTATGCTCGACGCTGCTGCTATTTTGGAAAAATTTCCTCTGCAGGAATCTATTCCTAAAAGTCTCTCATTGGAAGTTGTTGTTGAATCTCAGACAAAAAATCATAAACAACAAGACCATTCTGAAAGCCTAAACCATAGATTGGATTGTTCTGCCGAAAAAGGAGTAGAGAAAACATCGTGTTCATACCAAAAATATGGTAGCCACCTTTCAAATTACACCCCCTTTTCCGGAAATTCAGACCAGGCAAATGTCGGTTCCCAATATTTTAATCAGTCACCTGGACATCAGTGGTTAATTCCTGTTATGTCTCCTTCTGAGGGTCTTGTATACAAGCCATATCCCGGTCCTGGATATACTGGAGCCGTGTATGGAGGATACAGGCCTTTTGGACAAGGTCCTCCTGATGTTACATTCATGAATCCTGCCTATGGAGTTCCAGATTTTCATCAAGCAATTGCGGTGCCACCGTTCATTCCTCCAGGTGGTTATCCGTACTTCCCTCCTCATGGCGTGCCAGCAATGTATCAATCAGCATCAGTGTCAGCTGTTGAACAGAAAAATGGAGCCACATTACATGTCAGAAAACCTCAGCCATCTAGGGAAAGAGAGTTGGAAAGTAGTCCCGGTGAAAAGGCACAAGAAATAATAAAAGAGAAATCTGCTGAAGAAAGAGACACACTTTCTTCTTCCTTTACAGTTCCAATAGTATCAAAGGAAGTCCTTAAATCACTTGAAACAAGACAAAAACCGCAGGTAATCAGAGTTGTGCCACATAACCCACGATCTGCAACAGTATCAGCTGCTAGAATTTTTCAGTCGATCCAAGAAGAGAGAAAACGATATGATCTAGTCTAG 1857 0.4152 MKRGKGGDDEKVGPMFPRLHVNDTTEKGGPRAPPRNKMALYEQFSVPFQRLNPNSHSSSSNSIPLTSSSTMGNDLERSNIFPVRLPSQADAHRAKSYISHQSNGANLDTLSTQLEQGKKVDGDDSRAYDHSRIGQSNHKMTNSFNGEKITLVIPSRQNTVISVKSALTGEIIDSRVRQGKKIPDEEDQECSVSNINRFPQGDSCTRQESNDIEHSDGLLDTAMDMDNRNSFHSTVDRTMVLEAANDTEYHDANIDSPIQKGNSEGSGDLSNISTIENLSSLKLSPDGVVQILGQQLFWKARRKITNQQRAFAVQVFELHRLIKVQHLIAGSSNLMLDAAAILEKFPLQESIPKSLSLEVVVESQTKNHKQQDHSESLNHRLDCSAEKGVEKTSCSYQKYGSHLSNYTPFSGNSDQANVGSQYFNQSPGHQWLIPVMSPSEGLVYKPYPGPGYTGAVYGGYRPFGQGPPDVTFMNPAYGVPDFHQAIAVPPFIPPGGYPYFPPHGVPAMYQSASVSAVEQKNGATLHVRKPQPSRERELESSPGEKAQEIIKEKSAEERDTLSSSFTVPIVSKEVLKSLETRQKPQVIRVVPHNPRSATVSAARIFQSIQEERKRYDLV* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0411 618 MobiDBLite consensus disorder prediction 50 71 - -
Mtr1g0411 618 MobiDBLite consensus disorder prediction 1 35 - -
Mtr1g0411 618 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 155 521 - -
Mtr1g0411 618 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 519 618 - -
Mtr1g0411 618 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 151 - -
Mtr1g0411 618 MobiDBLite consensus disorder prediction 1 16 - -
Mtr1g0411 618 MobiDBLite consensus disorder prediction 529 546 - -
Mtr1g0411 618 PANTHER PROTEIN EARLY FLOWERING 3 519 618 IPR039319 GO:2000028
Mtr1g0411 618 PANTHER PROTEIN EARLY FLOWERING 3 1 151 IPR039319 GO:2000028
Mtr1g0411 618 PANTHER PROTEIN EARLY FLOWERING 3 155 521 IPR039319 GO:2000028
Mtr1g0411 618 MobiDBLite consensus disorder prediction 525 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0411 Mtr-Chr1 4618612 4622944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0411 K12125 - gmx:100788038 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0411 1 4618612 4622944 Mtr1g0411 1 4618612 4622944 ECH
Mtr3g3752 3 51356029 51361366 Mtr1g0411 1 4618612 4622944 ECH