Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0408 ATGCAATCGAGGGCTTTGGCATCTGAAGAAGGAAAATCAAAAGGGTTATCACTAAGATCACTGCGTTTACTTGTTGTTTTCCTTGCACTATGTGTTGTGTTTTCTGTCATAAGTGTATACACAATTAAGCATTTTGGAATTCAGAGTGTGGTTACTACAATGAGTTCAAGTTTTCAACCATGTATTGAAGAACAAGCTGGTTTGGAACAATGGATTAAACCTCCTTCAAATCTGATCCATAATATGAGTGACAAAGAACTTCTTTGGAGAGCTTCTTTGGTTCCTAAGATTAAGAATTACCCTTTTGAAAGAGTTCCTAAGATTGCTTTTATGTTTCTTACTAAAGGACCATTGCCTCTTGCACCAGTTTGGGAGAGGTTTTTGAAAGGGCATGAGAGTCGTTATAGTGTGTATGTTCATCCAACTCCTTCATATCAAGCTCATTTTCCTCCTTCATCTGTTTTTTATAAGAGGCAAATCCCTAGTCAGATTGCTGAGTGGGGAAGGATGAGCATGTGTGACGCCGAAAGAAGACTACTTGCTAATGCATTACTTGACATCTCCAATGAGCGGTTTATTCTATTGTCCGAATCATGCATCCCTCTCTACAAATTCAGTCTAGTCTACAACTATTTAATGAAATCCAAATTCAGCTTCGTCGGTGCATTTGATGATCCTGGTCCATACGGAAGAGGACGCTACAACCCAAACATGGCCCCTCTAGTCGACGTTGCAAAATGGCGTAAAGGCTCTCAATGGTTCGAAGTAAGTCGTAAGCTTGCCATCAACATTGTGGAAGACACCGCATTTTATCCTAAGTTCGAACAATACTGTAGACCGGCTTGTTACGTCGACGAGCACTATTTTCCAACCATGTTAACCATTCAAGCGGGGAGTGCGTTGGCAAATCGGAGCGTAACTTGGGTGGATTGGTCTAGAGGTGGAGCCCACCCAGCTACATTTGGAAGAACAGATATTACAAATGAATTTTTTGATAGAGTTCGTGGAGGTCAAAAATGCCTGTATAACAATAGAAACTCTACGCTTTGTTCTCTTTTTGCAAGAAAATTTGCTCCTAGTGCTTTGGAACCTTTGTTAGATATGGTGAATTCAAAAGTCTTAGACTTCTGA 1131 0.4041 MQSRALASEEGKSKGLSLRSLRLLVVFLALCVVFSVISVYTIKHFGIQSVVTTMSSSFQPCIEEQAGLEQWIKPPSNLIHNMSDKELLWRASLVPKIKNYPFERVPKIAFMFLTKGPLPLAPVWERFLKGHESRYSVYVHPTPSYQAHFPPSSVFYKRQIPSQIAEWGRMSMCDAERRLLANALLDISNERFILLSESCIPLYKFSLVYNYLMKSKFSFVGAFDDPGPYGRGRYNPNMAPLVDVAKWRKGSQWFEVSRKLAINIVEDTAFYPKFEQYCRPACYVDEHYFPTMLTIQAGSALANRSVTWVDWSRGGAHPATFGRTDITNEFFDRVRGGQKCLYNNRNSTLCSLFARKFAPSALEPLLDMVNSKVLDF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0408 376 Pfam Core-2/I-Branching enzyme 108 334 IPR003406 GO:0016020|GO:0016757
Mtr1g0408 376 PANTHER - 10 369 - -
Mtr1g0408 376 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 10 369 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0408 Mtr-Chr1 4599474 4606024 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0408 - - gmx:100785919 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0408 1 4599474 4606024 Mtr1g0408 1 4599474 4606024 ECH
Mtr3g3795 3 51776113 51778111 Mtr1g0408 1 4599474 4606024 ECH