Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0406 ATGGACTTTTCTCAATTTTCCACTATCCTCTTTCTCACCGTCATCCTAACCATCTTTGCCGCCGTTTCCGGTAGCCGTGACCTCCCCGGAGATTATATCCGATTGCCATCTCAATCTCAAGCCTCCAGGTTCTTCCATGAGCCTGAAAATGATGACAACGATCAAGGGACTAGGTGGGCTATTTTACTTGCTGGTTCTAATGGTTATTGGAATTATAGGCATCAGGCTGATGTTTGTCATGCGTATCAATTGTTGAGGAAAGGTGGCTTGAAAGAAGAAAACATTATTGTTTTCATGTATGATGATATTGCTTCCAATGTAGAGAATCCAAGGCCTGGAGTCATAATTAACAAACCTGATGGTGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGTGCAGAGGTACATGCTGACAATTTCTATGCTGCTTTACTTGGAAATAAATCAGCTCTTACAGGTGGGAGTGGGAAAGTTGTGGATAGTGGTCCCAATGATCATATTTTTGTATACTACACTGATCATGGAGGTCCAGGGGTTCTTGGTATGCCCGTTGGTCCTTACTTGTATGCATCTGATCTGAATGAAGTCTTGAAGAAAAAACATGCTTCTGGATCATATAAGAGCCTAGTATTTTATCTGGAGGCATGTGAATCTGGCAGTATATTTGAAGGACTTCTTCCAGAAGATATCAATATCTATGCGACAACGGCTTCAAATGCAGTAGAAAGCAGTTGGGGAACATATTGCCCTGGGGAGTACCCTCCCCCTCCTCCAGAGTACTCAACCTGCTTAGGTGACCTATACAGTATTGCTTGGATGGAAGACAGTGACATACACAATTTACGAACTGAAAGTTTGCACCAGCAATATAAATTGGTTAAAGATAGGACTATCAATGGTTACTATGGTTCTCATGTGATGGAGTATGGTGATGTAGGGCTTAGCAACAATCATCTCTTCCTATATTTGGGTACAAATCCTGCCAATGACAATATTAGTTTTGTGGATGAAAGCTCCTTGAAATTGAGATCGCCTTCAACAGCAGTTAACCAAAGGGATGCTGATCTCATTCATTTCTGGGATAAGTTCCGCAAAGCACCTGAGGGTTCTCTGCGGAAAAATGAAGCACAGAAAGAAGTTTTGGAAGCAATGTCCCACAGGATGCATGTAGACAACAGTGTGAAACTGATTGGAAAGCTCTTATTTGGCATTGAAAAGGGTACTGAACTGCTCGACAATGTTAGACCTGCTGGATCACCACTTGTTGATAACTGGGATTGCCTCAAAACCATGGTGAAAACTTTTGAGACACATTGTGGATCCCTATCTCAGTATGGTATGAAACATATGAGGTCCTTTGCGAACATCTGCAATGCAGGAATACAAACTGAGCAAATGGCCGAGGCCTCAGCACAAGCTTGTGCCAGTATTCCTGCCAACCCTTGGAGTTCTCTACAAAGGGGTTTCAGTGCATAG 1482 0.4258 MDFSQFSTILFLTVILTIFAAVSGSRDLPGDYIRLPSQSQASRFFHEPENDDNDQGTRWAILLAGSNGYWNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIASNVENPRPGVIINKPDGGDVYEGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDLNEVLKKKHASGSYKSLVFYLEACESGSIFEGLLPEDINIYATTASNAVESSWGTYCPGEYPPPPPEYSTCLGDLYSIAWMEDSDIHNLRTESLHQQYKLVKDRTINGYYGSHVMEYGDVGLSNNHLFLYLGTNPANDNISFVDESSLKLRSPSTAVNQRDADLIHFWDKFRKAPEGSLRKNEAQKEVLEAMSHRMHVDNSVKLIGKLLFGIEKGTELLDNVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIQTEQMAEASAQACASIPANPWSSLQRGFSA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0406 493 Gene3D - 353 481 IPR046427 -
Mtr1g0406 493 PANTHER VACUOLAR-PROCESSING ENZYME 1 492 - -
Mtr1g0406 493 Pfam Peptidase C13 family 58 326 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PIRSF AE 3 493 IPR043577 GO:0004197|GO:0051603
Mtr1g0406 493 PRINTS Hemoglobinase (C13) cysteine protease signature 59 83 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PRINTS Hemoglobinase (C13) cysteine protease signature 84 113 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PRINTS Hemoglobinase (C13) cysteine protease signature 131 146 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PRINTS Hemoglobinase (C13) cysteine protease signature 159 178 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PRINTS Hemoglobinase (C13) cysteine protease signature 208 224 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PANTHER HEMOGLOBINASE FAMILY MEMBER 1 492 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 PIRSF Legumain 4 493 IPR001096 GO:0006508|GO:0008233
Mtr1g0406 493 Gene3D - 56 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0406 Mtr-Chr1 4553620 4558827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0406 K01369 - gmx:547700 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0406 1 4553620 4558827 Mtr1g0406 1 4553620 4558827 ECH