Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01537 ATGAAACCGTGCATGGTTTTTCTCTTTGTCTTGTACTTCTTTCTTCATAGCTATGTTCAAGGTCGTTTTGTGGTAGAGAAAAACAGCATCACGGTTCTATCACCACATAAACTAAGAGGTAAAAACGATGGTGCTATAGGAAACTTTGGTATTCCAAATTATGGAGGGTATATTGTAGGGTCACTTGTTTATCCTGAAAAAGGCTCTCATGGTTGTCAAGTCTTTGAAGGTGATAAGCCTTTCAAGTTTCAGTCTCATCGTCCTACTATTGTTCTTCTTGATCGTGGAGAGTGTTATTTTGCCTTAAAGGTATGGCATGCTCAACTAGCTGGAGCCGCAGCAGTTTTAGTGGCTGACAGCATTGATGAGTCACTGATAACTATGGATTCTCCTGAGGAGAGCACCGATGCCGAAGGCTACATAGAGAAGATTGTAATTCCATCAGTACTAGTAGAGAAATCCTTTGGTGATTCATTGAAAGATGCTTTAAACAACAAAGATGAAGTTTTGCTGAGAATAGATTGGAGGGAATCGGTACCTCACCCTGATAATCGAGTGGAGTATGAGTTCTGGACCAACAGCAACGACGAATGTGGTGCACGTTGCGATGAACAAATGAATTTTGTGAAGAATTTCAAGGGTCATGCTCAGATTCTTGAGAGAGGTGGATATACACTGTTCACTCCACACTATATAACATGGTTTTGTCCAAAGCCATTTGTTGAAACCAGTCAGTGCAAGTCTCAATGTATAAACCACGGAAGATACTGTGCGCCGGATCCAGAGAAGGATTTTGCTGAAGGATATGAAGGGAAGGATATAGTGTATGAGAATTTGAGGCAGCTCTGTGTTCATAGAGTAGCGAACGAGAGCGGCCGTTCGTGGGTTTGGTGGGATTATGTGACAGATTTTCATGTTAGATGTTCTATGAAGGAAAAAAAATACAGCAAAGATTGTGCTGAAGTTGTCATGAAATCATTAGATCTTCCCATTGACAAAATTAAGAAATGTGTTGGTGATCCTGAAGCTGATGTGGAGAATGAAGTGCTAAAGATTGAACAAACATCACAGATTGGAGGAGGATCTCGTGGCGATGTCACCATTTTGCCAACATTGGTTTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACATCTGTCTTGAAGGCTATATGTGCTGGATTTAAGGAGACTACTGAACCTCAAGTCTGTTTAAGTGGAGATATTGAAACTAATGAGTGTCTGGAAAGAAATGGAGGATGCTGGGAAGACAGAAATGCTAATGTAACTGCTTGCAAGGATACTTTCCGGGGAAGAGTTTGTGAGTGCCCTGTTGTGAAAGGTGTTCAGTATAGGGGTGATGGTTATACAACATGTGAAGCTTTTGGACCTGCAAGATGTTCTTTAAACAATGGAGGTTGTTGGTCAGAAACTAGAGATAAAATTACATTCTCAGCTTGTTCAGAATCCAAGGTAAATGGTTGCCACTGTCCAGTTGGATTTCACGGAGACGGTAATAATAAATGTGAAGATGTTGATGAATGCAAGGAAAAAAGTGCTTGTCAGTGTGATGGTTGCAGTTGTAAGAACACTTGGGGTAGTTATGATTGTAAGTGCAAAGGAGGTCTTCTATATATGAAGGAACAAGATATGTGTATTGAAAGAAGTGGTTCAAAATTTGGAAAGGTCATTGCCTTTGTGGTCATAGCAGTTGTTGTGGGAACTGGTCTAGCTGGTTACGTGTTCTACAAGTATAGACTAAGGTCTTACATGGACTCTGAGATTATGGCTATCATGTCACAATACATGCCACTGGACCAGCAAAATAATGTAGTTCATGCTGAATCTGAGCCTTTACGACAAGGCAATGTGTAA 1878 0.4052 MKPCMVFLFVLYFFLHSYVQGRFVVEKNSITVLSPHKLRGKNDGAIGNFGIPNYGGYIVGSLVYPEKGSHGCQVFEGDKPFKFQSHRPTIVLLDRGECYFALKVWHAQLAGAAAVLVADSIDESLITMDSPEESTDAEGYIEKIVIPSVLVEKSFGDSLKDALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVETSQCKSQCINHGRYCAPDPEKDFAEGYEGKDIVYENLRQLCVHRVANESGRSWVWWDYVTDFHVRCSMKEKKYSKDCAEVVMKSLDLPIDKIKKCVGDPEADVENEVLKIEQTSQIGGGSRGDVTILPTLVLNNVQYRGKLERTSVLKAICAGFKETTEPQVCLSGDIETNECLERNGGCWEDRNANVTACKDTFRGRVCECPVVKGVQYRGDGYTTCEAFGPARCSLNNGGCWSETRDKITFSACSESKVNGCHCPVGFHGDGNNKCEDVDECKEKSACQCDGCSCKNTWGSYDCKCKGGLLYMKEQDMCIERSGSKFGKVIAFVVIAVVVGTGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAESEPLRQGNV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01537 625 Gene3D - 20 182 - -
Mepo6g01537 625 FunFam Vacuolar-sorting receptor 1 20 182 - -
Mepo6g01537 625 Pfam PA domain 60 159 IPR003137 -
Mepo6g01537 625 FunFam vacuolar-sorting receptor 1 405 461 - -
Mepo6g01537 625 Gene3D Laminin 405 461 - -
Mepo6g01537 625 CDD EGF_CA 512 543 - -
Mepo6g01537 625 Gene3D Laminin 466 550 - -
Mepo6g01537 625 SUPERFAMILY PA domain 85 169 IPR046450 -
Mepo6g01537 625 SMART egfca_6 512 554 IPR001881 GO:0005509
Mepo6g01537 625 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 4 611 - -
Mepo6g01537 625 ProSitePatterns Calcium-binding EGF-like domain signature. 512 538 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01537 Mepo-Chr6 16906200 16911738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01537 2 622 Miscellaneous Gene Families AT1G30900 69.887 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01537 - - gmx:100800382 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01537 6 16906200 16911738 Mepo6g01537 6 16906200 16911738 ECH