Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00387 ATGAAGAGATTCTTCACAGGCTGTGTCTCAAAGTTTCACTCCCACTCCAAACATAAGAAATCTCACTCTCACTCTCAGATAATGGCAGGAAACATCTCTGGTCCAAGTGGGAGCAATGCTGCTAATATTTTGCTGAATCATGACTTCTCAAATGACCTGAATTCTTGGCATCTCAATTGCTGCAATGGTTATGTAATTTCGTCCAAAGCAGGTGATCAAAGTGTAAATTTGATGGATTCGGATTGTAATTATGCTGTTATCACCGACCGAAATGAATGCTGGCAAGGTCTTGAGCAAGACATCACAGACAGAATTTCCATTGGTTCTGCTTACACGGTTTCGGCTTTTGTTGGAGTATCCGGCCTTTCCCAGGACTCTGCTGATGTGAAAGCTACACTGAAACTAGAATATCATGATTCAGCTACAAATTATTTGTTCATCGGAAGTACTTCTGTTATGAAGGGTAGCTGGGAAAAGTTGGAAGGAACATTTTCACTGTCAACTAAACCCGATCGGGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAATTGACTTGCTTATAAGATCAGTAGAGATCAACTGTTCCATTCCAAATGACAATAAGTTCACAAGTACAGAAGCATGTGTTTCTACTGGAGATGAAAGCATCATAATAAACCCACAATTTGAGGATGGCTTGAATAATTGGTCTGGAAGAAGCTGCAAGATTGTGTTGCATGATTCCATGGCAGATGGTAAAATTGTTCCAAAGTCTGGGAAATATTTTGCGTGCGCAACAGAACGAACGCAATTCTGGAATGGAATTCAGCAGGAGATAACTGGACGTGTGCAGCGCAAGCTGGCCTACGAGATCACTGCTTTAGTTCGAATATACGGCAACAATGTCACTAATGCCGATGTGCGAGCTACTTTGTGGGTTCAAACACCAGATCTCCGAGAGCAGTATATAGGCATTGCAAATGTGCAGGCAACCGATACAGATTGGGTGACGCTGCAGGGAAAATTCCTTCTAAATGGTCCCTCATCCAAAGCGGTCCTTTATTTAGAGGGACCTCCTTCTGGCACCGACATTCTTGTTAATACTTTGGTTGTAAAGCATGCTGCTAAAACACCTCCTTCGACACCACCAGCTGCACAGAATGTTGCTTTTGGAGTTAATATAATTGAGAACAGCAATCTTTCTGATGACACAAAAGGATGGTTTCCCCTTGGTAATTGCACTTTAACTGTTAAAACCGGTTCTCCTCATATACTTCCACCAATGGCAAGAGAATCTCTTGGACCTCACGGAATCCTGAGTGGCCGCTACATACTTGTAACTAATAGAACACAAACTTGGATGGGTCCTGCTCAGGTGATCACTGAGAAATTAAAGCTATTTTTGACTTATCAAGTATCTGCTTGGGTCCGGATTGGTTCCGGTTCAAATGGACCACAGAATGTGAATGTTGCCCTTGGTGCTGACAATCAGTGGATCAATGGAGGACAAACCGAGGTTTCGGATGATAGATGGCATGAAATTGGTGGATCCTTTAGAATTGAAAAGCAGCCAACAAAGATTATGGTTTATATCCAAGGTCCAGCTGCTGGTGTAGACTTAATGGTTGCCGGACTTCAAATTTTCCCTGTTGATAGACATGCAAGATTTAGATATTTAAAGATGCAGACAGACAAGATTCGGAAGCGTGATGTTGTCCTGAAATTCGCCGGACTAGACTCTAGCAGCTACCTTAACACCACGGTGCAAGTTAGACAAACACAGAACGATTTCCCGATTGGAACATGCATCAGCAGATCAAACATTGACAATGAAGATTTTGTCAACTTCCTTGTGAAACACTTCAACTGGGCTGTGTTTGCAAATGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATTTGAATTACAAAGACGCCGATGATCTTTTAACCTTGTGTCAGAAGTACAAGATCCAAACTCGCGGACACTGCATCTTCTGGGAAGTGGATGGAACCGTTCAGCAATGGATTAAGTCACTGAATAAAAATGATTTGATGACGGCTGTTCAAAACCGATTAACCAGTCTTCTGACTCGCTACAAGGGCAAGTTTAGTCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGATAGATTAGGCAAAGATATAAGGGCAAACATGTTCAAGACTGCAAACCAACTAGATCCATCCGCTACATTGTTTGTGAATGATTATCATATTGAAGATGGATGTGACACAAGATCGTGTCCAAATAAATACATTGAACACATTCTTGATTTGCAAGAACAAGGTGCACCCGTTGGTGGAATTGGAATTCAAGGACACATAGATAGTCCAGTTGGGCCTGTCGTTTGTTCTTCGCTTGATAAATTAGGTATTCTTGGTTTACCGATATGGTTTACAGAACTTGACGTGTCTTCTATGAATGAATATGTGAGAGGTGATGATCTTGAAGTTATGCTTAGGGAAGCCATGGCTCACCCTGCTGTTGAAGGGATAATGTTGTGGGGATTCTGGGAGTTGTTTATGAGTAGGGATAATGCACATTTGGTGAATGCAGAAGGTGATATTAATGAAGCGGGGAAAAGGTTTCTAGCTTTGAAACAAGAGTGGCTATCTCATAGTCATGGTCATGTTGATGAGCAAGGTCAATTCAACTTTAGAGGATTTTATGGAACATATAATGTGGAAATTGTGACACCATCAAAGAAAATTTCTAAGACATTTGTGCTTGATAAAGGTGACTCCCCAATGGAGGTGTCAATTGATTTATAA 2793 0.4142 MKRFFTGCVSKFHSHSKHKKSHSHSQIMAGNISGPSGSNAANILLNHDFSNDLNSWHLNCCNGYVISSKAGDQSVNLMDSDCNYAVITDRNECWQGLEQDITDRISIGSAYTVSAFVGVSGLSQDSADVKATLKLEYHDSATNYLFIGSTSVMKGSWEKLEGTFSLSTKPDRVVFYLEGPAPGIDLLIRSVEINCSIPNDNKFTSTEACVSTGDESIIINPQFEDGLNNWSGRSCKIVLHDSMADGKIVPKSGKYFACATERTQFWNGIQQEITGRVQRKLAYEITALVRIYGNNVTNADVRATLWVQTPDLREQYIGIANVQATDTDWVTLQGKFLLNGPSSKAVLYLEGPPSGTDILVNTLVVKHAAKTPPSTPPAAQNVAFGVNIIENSNLSDDTKGWFPLGNCTLTVKTGSPHILPPMARESLGPHGILSGRYILVTNRTQTWMGPAQVITEKLKLFLTYQVSAWVRIGSGSNGPQNVNVALGADNQWINGGQTEVSDDRWHEIGGSFRIEKQPTKIMVYIQGPAAGVDLMVAGLQIFPVDRHARFRYLKMQTDKIRKRDVVLKFAGLDSSSYLNTTVQVRQTQNDFPIGTCISRSNIDNEDFVNFLVKHFNWAVFANELKWYWTEPQQGNLNYKDADDLLTLCQKYKIQTRGHCIFWEVDGTVQQWIKSLNKNDLMTAVQNRLTSLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSATLFVNDYHIEDGCDTRSCPNKYIEHILDLQEQGAPVGGIGIQGHIDSPVGPVVCSSLDKLGILGLPIWFTELDVSSMNEYVRGDDLEVMLREAMAHPAVEGIMLWGFWELFMSRDNAHLVNAEGDINEAGKRFLALKQEWLSHSHGHVDEQGQFNFRGFYGTYNVEIVTPSKKISKTFVLDKGDSPMEVSIDL 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00387 930 FunFam Endo-1,4-beta-xylanase A 579 881 - -
Mepo4g00387 930 Gene3D - 210 368 - -
Mepo4g00387 930 Gene3D - 36 195 - -
Mepo4g00387 930 Gene3D - 383 542 - -
Mepo4g00387 930 SUPERFAMILY Galactose-binding domain-like 215 368 IPR008979 -
Mepo4g00387 930 PANTHER GLYCOSYL HYDROLASE 374 923 IPR044846 GO:0004553|GO:0005975
Mepo4g00387 930 SMART glyco_10 624 874 IPR001000 GO:0004553|GO:0005975
Mepo4g00387 930 FunFam Glycosyl hydrolase family 10 protein 211 367 - -
Mepo4g00387 930 SUPERFAMILY Galactose-binding domain-like 385 545 IPR008979 -
Mepo4g00387 930 SUPERFAMILY Galactose-binding domain-like 41 194 IPR008979 -
Mepo4g00387 930 SUPERFAMILY (Trans)glycosidases 578 881 IPR017853 -
Mepo4g00387 930 Gene3D Glycosidases 577 885 - -
Mepo4g00387 930 Pfam Glycosyl hydrolase family 10 587 844 IPR001000 GO:0004553|GO:0005975
Mepo4g00387 930 Pfam Carbohydrate binding domain 387 529 IPR003305 GO:0016798
Mepo4g00387 930 Pfam Carbohydrate binding domain 216 353 IPR003305 GO:0016798
Mepo4g00387 930 Pfam Carbohydrate binding domain 41 182 IPR003305 GO:0016798
Mepo4g00387 930 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 578 873 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00387 Mepo-Chr4 5781071 5786299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00387 1 930 Glycoside Hydrolase AT1G58370 67.545 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00387 - - gmx:100816678 1615.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00387 4 5781071 5786299 Mepo4g00387 4 5781071 5786299 ECH
Mepo4g00387 4 5781071 5786299 Mepo3g07248 3 86138999 86142655 PCT