Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00374 ATGAAGGAAGATGAAGAAGCTGATGATAGGAAAATCAACGAAGAGAAAGTTCAAGAATTCAAGCTTTGGGGAATTTTCCTCTTTGGCTTAATTGGTGCCACCGCCACCACTTTCGCCTTGTCCAGGTCGAAAGGCGGTTCTTTTCGATCAGCTTTTCAAGAAGAAGCATGGAAGCGGTACAATAAGCGATTGCAAGAGGAGTATGAGGAAGAGGCTGAAAGAGTGGAAAGAATAAGGCAAATGCAAAGTGTGTTTAATAGAGAAAGGGAGAAGACGTTTAGAAGAAAATACGAGAATTGGAAGGAAAATGGTTCTGGCACAAATCATCAGCATTTCCAAAGAGATGATTGGTATTCGAAAGCTGAACAAACCTTTAGAGACCAATGGAAAAATTACCGAGACACCCCAAGGGAAAATGGAAGCATAAATTATTCATTAACACACCACTACACGGTTTTGGGTCTTGACAGGTCTAGAACAACACCGTATACAGATGCTGAAATAAAGACTGCATTTAGGACAAAGGCAAAGCAGTATCATCCTGATCAGAACCAAGAGGATAAAGAGGCTGCTGAAGCTAAGTTCAAAGAAGTAATGGATTCATATGAGGCCATACTACAAGAAAGAAAGAATCATAGTCTGTAA 645 0.4031 MKEDEEADDRKINEEKVQEFKLWGIFLFGLIGATATTFALSRSKGGSFRSAFQEEAWKRYNKRLQEEYEEEAERVERIRQMQSVFNREREKTFRRKYENWKENGSGTNHQHFQRDDWYSKAEQTFRDQWKNYRDTPRENGSINYSLTHHYTVLGLDRSRTTPYTDAEIKTAFRTKAKQYHPDQNQEDKEAAEAKFKEVMDSYEAILQERKNHSL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00374 214 PRINTS DnaJ domain signature 190 210 IPR001623 -
Mepo4g00374 214 PRINTS DnaJ domain signature 172 187 IPR001623 -
Mepo4g00374 214 PRINTS DnaJ domain signature 150 168 IPR001623 -
Mepo4g00374 214 CDD DnaJ 149 203 IPR001623 -
Mepo4g00374 214 Coils Coil 54 81 - -
Mepo4g00374 214 Coils Coil 188 208 - -
Mepo4g00374 214 SUPERFAMILY Chaperone J-domain 145 210 IPR036869 -
Mepo4g00374 214 Pfam DnaJ domain 149 210 IPR001623 -
Mepo4g00374 214 Gene3D DnaJ domain 142 213 IPR036869 -
Mepo4g00374 214 SMART dnaj_3 147 210 IPR001623 -
Mepo4g00374 214 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 212 - -
Mepo4g00374 214 ProSiteProfiles dnaJ domain profile. 148 210 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00374 Mepo-Chr4 5617502 5622058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00374 149 213 Miscellaneous Gene Families AT5G49580 40.000 9.93e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00374 - - gmx:100804936 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00374 4 5617502 5622058 Mepo4g00374 4 5617502 5622058 ECH
Mepo4g00374 4 5617502 5622058 Mepo3g07240 3 86045385 86048203 PCT