Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00373 ATGGATCTTTATTTACTCGGTTGGATTTTAACCTCCGTTTTGAGTCTCTCTGCGTTATACAATTTGATTTTCGCCGGGAAGAGCAATTATGATGTGAATGAGAAGGTAAAGGATAGCGTTACGAGTACTGATGCCGGACAAATTCAATCGGAGAGACTTAACGGTGATGCTGATGTTATCATTGTTGGAGCTGGTATTGCTGGTGCTGCTTTAGCTCATACACTTGGGAAGGATGGACGTCGAGTGCATATTATTGAAAGAGATCTGAGTGAGCCTGACAGAATTGTTGGAGAGTTGCTACAACCTGGTGGCTATCTCAAATTAGTTGAACTCGGGCTTCAAGATTGTGTGGACAATATTGATGCACAGCGAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAACATACTCGTCTCTCTTATCCCTTGGAAAAGTTTCACTCAGATGTCTCTGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGCGAGAGAAGGCTGCCTCACTTCCCAATGTAAATATGGAGCAAGGAACAGTTATTTCCCTACTTGAAGAGAAGGGGACAGTCAAAGGTGTGCAATACAAGAATAAAGATGGTCAGGCATTGACAGCATATGCTCCTCTTACCATTGTTTGTGACGGCTGTTTCTCAAACTTGCGTCGTTCTCTTTGCAACCCTAAGGTAGATAATCCCTCTTGTTTTGTTGGCTTAATTTTAGAGAACTGTGAACTTCCATGTGCCAATCACGGCCATGTCATACTTGGAGATCCTTCGCCAATTCTTTTCTATCCTATAAGCAGTACAGAGATACGTTGTCTGGTTGATGTACCCGGTACAAAGGTTCCTTCTATTTCAAACGGTGATATGACAATGTATCTAAAGACAACAGTTGCTCCACAGGTCCCCCCTGAGCTTTATGATGCATTCATTGCTGCAGTGGACAAAGGCAACATAAGGACAATGCCGAACAGAAGTATGCCAGCAGATCCTCGTCCTACTCCTGGAGCCGTACTGATGGGAGATGCATTCAACATGCGTCATCCACTAACAGGGGGCGGAATGACCGTAGCATTGTCTGACATTGTGGTGTTGAGAAATCTTCTCAAGCCTATGCGTGACCTGAACGATGCACCTACACTTTGCAAATACCTCGAATCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACCATAAATACATTGGCAGGAGCCCTTTACAAGGTTTTTAGTGCATCCCCTGATGAAGCAAGGAAGGAAATGCGCCAAGCTTGTTTTGATTATCTGAGCCTTGGAGGCCTATTCTCAGAAGGACCGATCTCTTTACTTTCAGGATTAAACCCCCGGCCCTTAAGCTTGGTTCTCCATTTCTTTGCTGTCGCGGTATTTGGTGTTGGCCGTTTACTATTACCATTTCCTTCACCTAAGCGGGTGTGGATTGGAGCTCGATTACTCTCTGGTGCATCTGGAATCATTTTACCCATAATTAAGGCCGAAGGAATTCGGCAGATGTTTTTCCCTGCCACTGTTCCAGCTTATTACAGAGCTCCCCCGGTAAATGCATTTTGA 1572 0.4459 MDLYLLGWILTSVLSLSALYNLIFAGKSNYDVNEKVKDSVTSTDAGQIQSERLNGDADVIIVGAGIAGAALAHTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDAQRVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVISLLEEKGTVKGVQYKNKDGQALTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILENCELPCANHGHVILGDPSPILFYPISSTEIRCLVDVPGTKVPSISNGDMTMYLKTTVAPQVPPELYDAFIAAVDKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPMRDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDEARKEMRQACFDYLSLGGLFSEGPISLLSGLNPRPLSLVLHFFAVAVFGVGRLLLPFPSPKRVWIGARLLSGASGIILPIIKAEGIRQMFFPATVPAYYRAPPVNAF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00373 523 PANTHER SQUALENE MONOOXYGENASE 22 519 IPR040125 GO:0004506|GO:0016126
Mepo4g00373 523 Pfam Squalene epoxidase 208 480 IPR013698 GO:0004506|GO:0016020|GO:0050660
Mepo4g00373 523 SUPERFAMILY FAD/NAD(P)-binding domain 57 431 IPR036188 -
Mepo4g00373 523 Gene3D - 45 412 IPR036188 -
Mepo4g00373 523 Pfam NAD(P)-binding Rossmann-like domain 61 87 - -
Mepo4g00373 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 335 350 - -
Mepo4g00373 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 207 222 - -
Mepo4g00373 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 58 80 - -
Mepo4g00373 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 350 366 - -
Mepo4g00373 523 FunFam Squalene monooxygenase 2 51 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00373 Mepo-Chr4 5611353 5615608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00373 18 520 Miscellaneous Gene Families AT1G58440 75.889 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00373 K00511 - gmx:100804406 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00373 4 5611353 5615608 Mepo4g00373 4 5611353 5615608 ECH
Mepo4g00373 4 5611353 5615608 Mepo3g07239 3 86039717 86043948 PCT