Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00363 ATGGATCTTGGTGTAGTGAGTTTAGAAGGTTTGGTTAGTTCAGATCCTGAGTCAAAAAACAAATGGTACAACAACAATGGATCTGGCTTACTTAAACAAGAGAGATCTGGAACATGTACTGAAGATGAGTTAAGAAGTTTCAAACTTGCAAAAACTGATCAACAAAGAAACAATTGTTCTGCTTCACTTTTGAGATCTAATGCTACTACTACACTTTTTTCTTCTGATGGTCAACACCAACAGCAACAAATGCTTAGTTTTTCAACTCCAACTTCAAAATCAGAATCTTTTTTAGTTGACAAAACTACCCAAAATGCTGCATTGTCTTATGCTGCTTCTTACCATCCTATGTCTAGTTACAACAGAAATACAGGTTATAGTTCTGGAAGCATGCATGGAGGTTTAAGTGGTGTTAGAGGACCATTCACACCTTCTCAATGGATGGAGTTGGAACATCAGGCTTTGATCTATAAGTACATCACTGCAAATGTTGCTGTACCTCATCATTTGCTTATACCTATCAGAAAAGCCCTTGATTCTGCTGGCTTATCTAGCTTCTCAACTGCTCTCCTCAGACCAAATGCATTGGGATGGGGAGGATTCCATCTGGGATACTCGAACAACACCGATCCGGAACCAGGAAGGTGTAGGAGAACAGATGGAAAGAAATGGCGATGCTCAAGAGATGCCGTTGTCGATCAAAAGTACTGCGAAAGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCTGGCCAGGCTCTCACCACTGGTGGAACCACAAATACAGCTACTACTACTAATTCTACCATTACTCCAGATGGTTCATCAAAGCAGATCAATTCTGCTGCTGCTTCTCCTTCTTCATCTATTGTTGTTCCTGGTGGCAACACTGTTTCCAACACTCTTAGTTTTGCACACCAGGAACATTCCAAGAATATGAACAGCCTTATTGGACAAGATAACGCTTCTGCTGCTGCCAACACCATCAACAGGATGTTCATGAATAACAAAGAGAATAACAACACTAGTGAGAGGATGCAGGATGGTCCTGCACTACCAATGCTGCCACCCACTCTAGAGTTGAAACCAAAGGAAAATCAACCTTTCATGATTCAAAAACAGCACATTTCATATGATGAGTCTTCAAGGAACAACGAATTCGGGTTTGTCACTTCCGATTCCCTTCTGAATCCGTCACAGAAAACCTCCACTTTGCTGGGAACCCGAACCTTCGGTTCATCTTCACAAAACCCTACAAACCGAGATGCAGGCTCTCAGCAATCCCTTAGGCATTTTATCGATGACTTTCCCAAAACTCACTCAGATCACCAACATCATAACCGCTCAGGTGGTTTTTCTTGGCCGGAGCTTGACATGCAGCAGTCTGATAGGACACAACTATCAATTTCAACACCGATGACTTCCTCAGACTTCATGTCGTTCACTTCCTCGGCAACCAATGAAAAACTCACACTTTCACCTCTTAGGCTATCAAGAGAAATAGACCCTATTCAAATGGGGTTAGGTGTTGGAAGTAGTGCTCTCAATAACAACAATGAATCATCAAACACTGGTACTGCAAAGCAAGCTAATTGGATCCCAATAACTTGGGAGAGTTCAATGGGTGGTCCACTTGGAGAGGTTCTTCATCTTAGTAATACTATTACCTACAATGCAAATGATGATCACTATGGCAGCGGCAACAACAATTCGTCCGCCCTAAATCTCATGACTGATGGTTGGGACAATCACAATAGTCCTCCAATGGGATCATCGCCAACCGGAGTCCTTCAAAAGACAGCATTTGGATCGCTTTCAAATAGTAGCGCCGGTAGTAGTCCAAGAGCAGAGAACAATAAAACAACTCAAGAAGGAGCTAGTTTGTGCAATGATCTTCTAGGATCAACTCTTGGTAATAATGCTTCCTTTACTCCTTAG 1956 0.4238 MDLGVVSLEGLVSSDPESKNKWYNNNGSGLLKQERSGTCTEDELRSFKLAKTDQQRNNCSASLLRSNATTTLFSSDGQHQQQQMLSFSTPTSKSESFLVDKTTQNAALSYAASYHPMSSYNRNTGYSSGSMHGGLSGVRGPFTPSQWMELEHQALIYKYITANVAVPHHLLIPIRKALDSAGLSSFSTALLRPNALGWGGFHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGQALTTGGTTNTATTTNSTITPDGSSKQINSAAASPSSSIVVPGGNTVSNTLSFAHQEHSKNMNSLIGQDNASAAANTINRMFMNNKENNNTSERMQDGPALPMLPPTLELKPKENQPFMIQKQHISYDESSRNNEFGFVTSDSLLNPSQKTSTLLGTRTFGSSSQNPTNRDAGSQQSLRHFIDDFPKTHSDHQHHNRSGGFSWPELDMQQSDRTQLSISTPMTSSDFMSFTSSATNEKLTLSPLRLSREIDPIQMGLGVGSSALNNNNESSNTGTAKQANWIPITWESSMGGPLGEVLHLSNTITYNANDDHYGSGNNNSSALNLMTDGWDNHNSPPMGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKTTQEGASLCNDLLGSTLGNNASFTP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00363 651 Pfam WRC 211 253 IPR014977 -
Mepo4g00363 651 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo4g00363 651 MobiDBLite consensus disorder prediction 237 298 - -
Mepo4g00363 651 MobiDBLite consensus disorder prediction 581 637 - -
Mepo4g00363 651 MobiDBLite consensus disorder prediction 404 431 - -
Mepo4g00363 651 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo4g00363 651 PANTHER GROWTH-REGULATING FACTOR 5 78 483 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo4g00363 651 MobiDBLite consensus disorder prediction 254 298 - -
Mepo4g00363 651 ProSiteProfiles WRC domain profile. 210 254 IPR014977 -
Mepo4g00363 651 Pfam QLQ 141 175 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00363 Mepo-Chr4 5464537 5469041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00363 1 609 GRF Transcription Factor Family AT2G22840 39.587 1.47e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo4g00363 WRC 6.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00363 - - cam:101496763 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00363 4 5464537 5469041 Mepo4g00363 4 5464537 5469041 ECH