Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00360 ATGGCGAATAATCCTCAACAACCTTCTTCTATTCAGTTTCGGCCAGTCATTCATACGCAGCAAGGGCCACCATTTGTTCCCATGACTTCACAACAATTCGGACATGCAGGGCATGCCGTTCCTTCATCTAATGTTGGAATGCCTGCTATTCAAGGTCAGCAATTGCAGTATTCTCAACAAATGCAACAGTTGGGTCCAAGACAAATTCAGCCCGGTCATCCTGTTTCATCATCACAGGGTATACCTATGCCATATATTCAAACAAACAGGCCACTGGCATCTGTTCCACAACATGCACAGCAAGCTGTTCCTCACATAAACAATCATATGCCTGGCTTGCCTGTTTCAGGAGCACCTCCTCAATCTCTATACACTTTCACACCATCTTATGGTCAGCAGCAAGACAATGCCAATGCATTGCCCCAATACCAGCATCCGCCTCAAATGCATGCACCTCCTGCCGGACAACCTTGGTCATCCTCAGTACCTCAGAGTGCTGCAGCTGCAACGCCTGTACAGCCGGCTGGAGTTCAATCATCTGGTACTGCATCAAATGATGCTGCAACTAATACCACTAGCAACAACTCTGCATCTGATTGGCAAGAGCATACTGCTGGTGATGGGAGAAGATATTACTACAACAAGAGTACAAGGCAATCTAGTTGGGAAAAACCTTTGGAGTTGATGTCACCTCTTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAGTTCACTTCTTCAGAGGGAAGAAAGTATTATTACAACAAGGTCACTCAGCAATCAGTATGGACAATACCAGAAGAACTCAAGTTGGCCCGTGAGCAGGCACATAAAACTATTAGCCAGGGAATGGTGTCAGAAACAAGTGATACATCCAATGCTGCTGCCTCCTCTGCTGCAACATCAACTCCACCAGCTAACGCAGCTAGCTCCAACACTTTGACATCTAATGGTCTTGCTTCAAGCCCATCTTCTGTTACACCAGTTGTTGCCAGTGATAATCAACGACCAGTTTCTGGATTATCAGTGGCCTCTGTTTCCCATTCTGTCGTTACTTCAAGCACCACAGGAGTTGAACCAAGCACTGCTGTAACTGTGAGCACTGCACCTACAGCAGTTGCAGGAAGCTTAGGAGTAGTAGCCAACTCTCTTGATTCAAAAATTCCATCCATTGTTGAAAATCGAGCAACTCATGATTCTATTTCTTCTGTCAATGGAGCACCTCTTCAAGATATGGAGGAAGCCAAAAAAGGAGTTCCTGTGGTTGGACAAACTAATGTGACTCCTTCAGAGGAGAAAACCAATGATGGTGAAACTTTGGTATATGCAAATAAGCTGGAAGCAAAAAATGCATTTAAAGCGCTTTTGGAATCTGTGAATGTTCATTCTGATTGGACGTGGGAACAGGCAATGAGAGAAATCATCAATGATAAAAGATATAATGCCCTGAAAACACTTGGTGAGCGAAAACAAGCTTTCAACGAGTATTTGGGTCAAAGGAAGAAGCTAGAGGCTGAAGAAAGGCGCATAAAGCAGAAAAAGGCCCGTGAAGAATTCACAAAGATGTTAGAAGAGTGCAAGGAGCTAACATCATCCACAAGATGGAGCAAAGCTATAAGTATGCTTGAAAATGATGAACGATTTAATGCTGTTGAAAGATTAAGAGATCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAAATGCTGCTGATGAACACCGGCGGAATTTAGCAGAATATAGGAAATTTCTGGAGTCCTGTGATTTTGTGAAGGTGAATAGTCATTGGCGAAAAATCCAAGATCGGCTAGAGGATGATGATAGATACTCACTGCTTGAAAAAATTGATCGCTTGCTTGTTTTCCAGGATTATATTCGTGACTTGGAGAAGGAGGAAGAGGAACAAAAAAGGATACAGAAGGAACGAGTTCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTAGAAGAACATATTGCTGATGAAGTTCTTACTGCTAAAACACAGTGGCGAGATTATTGCTTGAAGGTGAAAGAGTTGCCTCAATACCAAGCTGTTGCATCAAATACATCCGGTTCTACTCCAAAAGATTTATTTGAGGATGTCTTTGAAAATCTTGAAAAGCAGTATCATGAAGACAAGACACTCATAAAAGATATACTTAAGTCGGGCAAGATCACCGTAGCGACTACATCAGTATTTGAGGACTTCAAGTCTGCTGTATCAGAAGAAGCTGCTTGCAAAACGATATCGGAGATCAATTTGAAGCTTTTATTTGAGGAGTTATTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGACTTTACTAACTTGTTATACACGCTCAAGGATATTATTACTTCTTCAACATGGGAGGAATGCAAGGCACTTTTTGAGGACACACAAGAATACATTTCAATTGGGGATGAAAGCTATAGTAAAGAAATTTTTGAGGAATACATTACATACTTGAAGGAAAAAGCTAAAGAGAAGGAACGTAAGCGTGAGGAAGAAAAGGCCAAAAAGGAGAAAGAAAGAGAAGAGAAAGAAAAACGTAAAGAGAAGGAGAAAAAAGAGAAGGAAAGAGAACGTGAGAAAGAAAAATCAAAAGATCGACATAAAAAAGATGAATCAGATAGTGATAATCAAGACATGACTGACAGCCATGGTTATAGAGAGGAGAAGAAAAAAGAAAAGGATAAAGAGAGAAAACATCGAAGAAGGCATCAGAGCAGTATGGAGGATGTGGATTCTGAAAAAGATGAGAAGGAAGAGTCTAGAAAATCGCGAAGACATGGAAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTCCTGAGTCAGACAATGAAAGTAGGCATAAAAGACACAAGAGGGACCATGGGGACGGTTCCAGGAGAACTGGATGGAATGATGAGCTTGAAGATGGGGAGCTTGGCGATGATGGAGAGGTTTAG 3015 0.4212 MANNPQQPSSIQFRPVIHTQQGPPFVPMTSQQFGHAGHAVPSSNVGMPAIQGQQLQYSQQMQQLGPRQIQPGHPVSSSQGIPMPYIQTNRPLASVPQHAQQAVPHINNHMPGLPVSGAPPQSLYTFTPSYGQQQDNANALPQYQHPPQMHAPPAGQPWSSSVPQSAAAATPVQPAGVQSSGTASNDAATNTTSNNSASDWQEHTAGDGRRYYYNKSTRQSSWEKPLELMSPLERADASTVWKEFTSSEGRKYYYNKVTQQSVWTIPEELKLAREQAHKTISQGMVSETSDTSNAAASSAATSTPPANAASSNTLTSNGLASSPSSVTPVVASDNQRPVSGLSVASVSHSVVTSSTTGVEPSTAVTVSTAPTAVAGSLGVVANSLDSKIPSIVENRATHDSISSVNGAPLQDMEEAKKGVPVVGQTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVNVHSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSKAISMLENDERFNAVERLRDREDLFESYMVELERKEKENAADEHRRNLAEYRKFLESCDFVKVNSHWRKIQDRLEDDDRYSLLEKIDRLLVFQDYIRDLEKEEEEQKRIQKERVRRGERKNRDAFRKLLEEHIADEVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFENLEKQYHEDKTLIKDILKSGKITVATTSVFEDFKSAVSEEAACKTISEINLKLLFEELLERAKEKEEKEAKKRQRLADDFTNLLYTLKDIITSSTWEECKALFEDTQEYISIGDESYSKEIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKEREREKEKSKDRHKKDESDSDNQDMTDSHGYREEKKKEKDKERKHRRRHQSSMEDVDSEKDEKEESRKSRRHGSDRKKSRKHANSPESDNESRHKRHKRDHGDGSRRTGWNDELEDGELGDDGEV 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00360 1004 Coils Coil 628 648 - -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 959 993 - -
Mepo4g00360 1004 Pfam WW domain 241 266 IPR001202 GO:0005515
Mepo4g00360 1004 Pfam WW domain 198 225 IPR001202 GO:0005515
Mepo4g00360 1004 ProSiteProfiles FF domain profile. 512 567 IPR002713 -
Mepo4g00360 1004 ProSitePatterns WW/rsp5/WWP domain signature. 200 225 IPR001202 GO:0005515
Mepo4g00360 1004 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 193 806 IPR039726 GO:0045292
Mepo4g00360 1004 ProSiteProfiles FF domain profile. 580 634 IPR002713 -
Mepo4g00360 1004 FunFam Pre-mRNA-processing protein 40A 781 854 - -
Mepo4g00360 1004 Gene3D FF domain 576 644 IPR036517 -
Mepo4g00360 1004 Gene3D FF domain 645 726 IPR036517 -
Mepo4g00360 1004 Gene3D FF domain 501 575 IPR036517 -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 116 203 - -
Mepo4g00360 1004 SUPERFAMILY WW domain 199 233 IPR036020 GO:0005515
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 280 333 - -
Mepo4g00360 1004 Coils Coil 769 793 - -
Mepo4g00360 1004 SUPERFAMILY FF domain 780 849 IPR036517 -
Mepo4g00360 1004 ProSiteProfiles FF domain profile. 652 715 IPR002713 -
Mepo4g00360 1004 FunFam Pre-mRNA-processing protein 40A 575 643 - -
Mepo4g00360 1004 Gene3D FF domain 445 500 IPR036517 -
Mepo4g00360 1004 ProSiteProfiles FF domain profile. 445 499 IPR002713 -
Mepo4g00360 1004 FunFam Pre-mRNA-processing protein 40A 645 726 - -
Mepo4g00360 1004 Coils Coil 840 891 - -
Mepo4g00360 1004 Gene3D FF domain 782 855 IPR036517 -
Mepo4g00360 1004 SUPERFAMILY FF domain 572 641 IPR036517 -
Mepo4g00360 1004 ProSiteProfiles WW/rsp5/WWP domain profile. 194 227 IPR001202 GO:0005515
Mepo4g00360 1004 FunFam Pre-mRNA-processing protein 40A 501 574 - -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 850 1004 - -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 154 202 - -
Mepo4g00360 1004 SMART ww_5 195 227 IPR001202 GO:0005515
Mepo4g00360 1004 SMART ww_5 236 268 IPR001202 GO:0005515
Mepo4g00360 1004 CDD WW 198 227 IPR001202 GO:0005515
Mepo4g00360 1004 FunFam pre-mRNA-processing protein 40A isoform X1 444 499 - -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 120 143 - -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 926 950 - -
Mepo4g00360 1004 Gene3D - 236 279 - -
Mepo4g00360 1004 Gene3D - 192 235 - -
Mepo4g00360 1004 SMART FF_2 445 499 IPR002713 -
Mepo4g00360 1004 SMART FF_2 512 567 IPR002713 -
Mepo4g00360 1004 SMART FF_2 787 842 IPR002713 -
Mepo4g00360 1004 SMART FF_2 580 634 IPR002713 -
Mepo4g00360 1004 SMART FF_2 654 715 IPR002713 -
Mepo4g00360 1004 Coils Coil 570 590 - -
Mepo4g00360 1004 MobiDBLite consensus disorder prediction 850 919 - -
Mepo4g00360 1004 CDD WW 241 268 IPR001202 GO:0005515
Mepo4g00360 1004 SUPERFAMILY FF domain 647 722 IPR036517 -
Mepo4g00360 1004 Coils Coil 493 516 - -
Mepo4g00360 1004 Pfam FF domain 514 564 IPR002713 -
Mepo4g00360 1004 Pfam FF domain 583 631 IPR002713 -
Mepo4g00360 1004 Pfam FF domain 656 711 IPR002713 -
Mepo4g00360 1004 Pfam FF domain 447 496 IPR002713 -
Mepo4g00360 1004 ProSiteProfiles WW/rsp5/WWP domain profile. 235 268 IPR001202 GO:0005515
Mepo4g00360 1004 SUPERFAMILY WW domain 240 273 IPR036020 GO:0005515
Mepo4g00360 1004 SUPERFAMILY FF domain 504 574 IPR036517 -
Mepo4g00360 1004 SUPERFAMILY FF domain 438 499 IPR036517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00360 Mepo-Chr4 5429646 5446272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00360 K12821 - gmx:100806019 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00360 4 5429646 5446272 Mepo4g00360 4 5429646 5446272 ECH