Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00349 ATGATTTCTAAGATGGATAAGATCAAAGTGAAGTATCAACTCAAAAACGAAGATTGGAAACCATCACCAGTTACTGCTTTAGCTGCAAGCATAGACGGTACACGTGTTGCAGCTTCGCGTGAAGACGGTTCTTTAGAGCTTTGGCTTGTTTCTGCTAATACAATTGGTTGGCACTGTCAATTGACAATTCATGGAGACCCTAATAGAATTGTTTCTTCTTTAATTTGGTGTCCTGGTGCTGGATTTCCTCATGGTCGTTTGTTTTCTTCAAACATTGATGGTTCTGTTTCTTTTTGGGATCTCCAACAATTGAAACAAACGATGGTGCTTGAATCAACTGGTGTCTCAATCTGGAAAATGGCTGTGACACTGGCTAAAAGTGACGATGTTGAAACTAATGGTCATCACATAGGGAATGGTTATTTGAAGAAATTGCATGGTTCGGATGAAAACGAGAACAGTGAAAGTGATGAAGATTCCGATTCACCCGATGTTCTCAAGCAATCCAGTTCAGTGAAGCCAAGAGTCGCAGTTGCTTTTGATGATGGATGTGTTAAAATTTACACTATATCTGATGCAAATGAATTTATATATTTAAAGTCCCTGAACCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACGGATGCTAAATTCATATGTTCAGGAAGTAGTGATGGGATAATTCGAATCTGGGATGCCAAATCAGGTATTGAAGCCCATAATATGTCAGCAGGACTGGGTAGAGACAGTGGACATGAACTTTGTATATGGTCACTACTGTATTTAAGGTCTGGGATACTTGTTAGTGGAGACAGCAGTGGTAGCGTCCAGTTTTGGGATTGCCGTGAAGGAGCTCCCTCTCAACAACCTATTATTAAACACAAGGGAGATGTACATGCTCTAGCAGTAGCCCCTGATCACAATATGCTGTTCTCTGCTGGTGCTGATGGACAGGTTATTCTTTATAAGCTGTCTGAGTCAACGATAGAGAAAGAGAAGTGGATATACGTTGATTATGAAGTAGCTAATAAACTTGACGCCCGAGCCTTGACTGTTGCTGTGCCGATAAGTCAAGAAGATGCTTTGCCAGGTGAAAGGATCAAAAAAGCTCGTCGTGAAGAAAAGCCAGATGATTCTAGTTACCACAAATGGGCTCATTCGGGGCATCCCATGCTTATCTCAGCAGGAGATGACACAAAACTCTATGCATACCCCGTAAAAGAATTCACCAATTTTAAAGCTCACTGTATCTGTCCTGTGCCTCAAAGAACACCCATTCAAGTAGCACTTAATACTTCATTCAACCAGTCACCAATGCTTTTACTGCAGTCTTCACATTGGATAGAAGTCCGTTTGCTACATCTCAGAAATGTTCGCAGAACTGGAGACTACGCAAAATCTGAAACTGTTGGCCGATTCAAGATTAAGGCATCTCGTAGGATAATTTGTAGCACCCTTGCTAATTCAGGGGAATTTTTTGCGTTTTCTGATAATGAAAAGCCTACTCTTTATAAAGTGGAGAGATCTGAAGCCGGAAAAATTACATGGAGTTTTGGTAAAAGGAAGCTTCCTGAGAGATTACCATTTGCCCATTCAATGATTTTTTCTCATGATTCCTCTTTGTTGATAGTAGCTGGCTATGATAGAAGGATATATGTTGTGGATGCCAATAGCTCGGAACTAGTACATACTTTTACACCCTTTCGTGAACTGCAAGATGATGGATTATCACCAGCCGAACCACCCATCACAAAATTGTTTACTAGTTCTGATAAGCAGTGGTTGGCTGCCGTGAATTGCTTTGGAGATATCTATGTATTTAACTTGGATTTACTAAGGCAGCACTGGTTCATTTCGAGATTGGATGGTGCTTCTGTTACAGCTTGTGGATTTTCACCCCAGATCAACAATGTACTGATAGTTACAACCTCTTCAAATCGAGTGTATGAATTCGACGTAGATGCCAAGAAATGGGGGGATTGGTCAGTGCGGAATACATTTGTTCTTCCTAGGAGATTTCACGAGTTTCCTGGTGAAGTCATCGGACTTTCATTCCCTCCCTCTTCAACTTCATCTTCTGTGATGGTTTATAGCTCCAGGGCTATGTGCTTGATTGACTTTCGCTTGCCCGTGAAGCCAGATGAAGGTGAAATGTTTCATACTCGTGAATTGGATGAAAGTGAAATGTTTCGTACTCGAGAATCAGTTGTCAAGAATTCGCCAAATTTTAACGTTAAGAAACGGACAAAATTTAGGAAGAACATTGAAGTTTTGCCGAAGAGCTTTGAAAACTTTGAAGTTTTGCCGTTCGAAAAAGATCGTGTCTTATATCTATCTCATATTTCAAATAATCACTTCTTTATGATTGAAAAACCCTGGTCCGATGTGGTCAGTAGTTTAGATGTTCAACCAGTCCACAGACATATTTATGGGGCATAG 2445 0.407 MISKMDKIKVKYQLKNEDWKPSPVTALAASIDGTRVAASREDGSLELWLVSANTIGWHCQLTIHGDPNRIVSSLIWCPGAGFPHGRLFSSNIDGSVSFWDLQQLKQTMVLESTGVSIWKMAVTLAKSDDVETNGHHIGNGYLKKLHGSDENENSESDEDSDSPDVLKQSSSVKPRVAVAFDDGCVKIYTISDANEFIYLKSLNRVKGRVLSVTWSTDAKFICSGSSDGIIRIWDAKSGIEAHNMSAGLGRDSGHELCIWSLLYLRSGILVSGDSSGSVQFWDCREGAPSQQPIIKHKGDVHALAVAPDHNMLFSAGADGQVILYKLSESTIEKEKWIYVDYEVANKLDARALTVAVPISQEDALPGERIKKARREEKPDDSSYHKWAHSGHPMLISAGDDTKLYAYPVKEFTNFKAHCICPVPQRTPIQVALNTSFNQSPMLLLQSSHWIEVRLLHLRNVRRTGDYAKSETVGRFKIKASRRIICSTLANSGEFFAFSDNEKPTLYKVERSEAGKITWSFGKRKLPERLPFAHSMIFSHDSSLLIVAGYDRRIYVVDANSSELVHTFTPFRELQDDGLSPAEPPITKLFTSSDKQWLAAVNCFGDIYVFNLDLLRQHWFISRLDGASVTACGFSPQINNVLIVTTSSNRVYEFDVDAKKWGDWSVRNTFVLPRRFHEFPGEVIGLSFPPSSTSSSVMVYSSRAMCLIDFRLPVKPDEGEMFHTRELDESEMFRTRESVVKNSPNFNVKKRTKFRKNIEVLPKSFENFEVLPFEKDRVLYLSHISNNHFFMIEKPWSDVVSSLDVQPVHRHIYGA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00349 814 Pfam WD domain, G-beta repeat 295 324 IPR001680 GO:0005515
Mepo4g00349 814 ProSiteProfiles Trp-Asp (WD) repeats profile. 293 334 IPR001680 GO:0005515
Mepo4g00349 814 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 12 813 IPR044622 GO:0010073|GO:0035266
Mepo4g00349 814 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 243 IPR001680 GO:0005515
Mepo4g00349 814 ProSitePatterns Trp-Asp (WD) repeats signature. 221 235 IPR019775 -
Mepo4g00349 814 SUPERFAMILY WD40 repeat-like 173 658 IPR036322 GO:0005515
Mepo4g00349 814 MobiDBLite consensus disorder prediction 141 168 - -
Mepo4g00349 814 Gene3D - 162 423 IPR015943 GO:0005515
Mepo4g00349 814 Gene3D - 517 720 IPR015943 GO:0005515
Mepo4g00349 814 SUPERFAMILY Nucleoporin domain 384 569 - -
Mepo4g00349 814 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 202 238 - -
Mepo4g00349 814 SMART WD40_4 103 189 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 7 49 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 56 100 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 244 282 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 522 557 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 287 325 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 616 654 IPR001680 GO:0005515
Mepo4g00349 814 SMART WD40_4 195 234 IPR001680 GO:0005515
Mepo4g00349 814 Pfam Anaphase-promoting complex subunit 4 WD40 domain 177 247 IPR024977 -
Mepo4g00349 814 Gene3D - 9 153 IPR015943 GO:0005515
Mepo4g00349 814 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 21 245 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00349 Mepo-Chr4 5287052 5295242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00349 200 327 Acyl Lipid Metabolism Gene Families AT3G18860 31.783 2.87e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00349 K14548 - gmx:100797494 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00349 4 5287052 5295242 Mepo4g00349 4 5287052 5295242 ECH