Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03199 ATGACATCACAACCGTCGATTCCATCTCCTCCTCCGCCATTACCACCGCCACCTGCATCAACGGCACCACCGTCGGACGGCGGCGTTCGTGTTCGCTGCGCCGGTTGTCGGATGATCTTAACTGTAGCGCCTGGACTAACCGAATTCGCTTGTCCTACGTGTCGAATGCCGCAGATGCTTCCGCCGGAACTCATGGCTAGGGTACACCAAACGGCACCGCCGGTAACTCCGCCAACGCAGAATTTGCCGGCGCATGGTATTGATCCTACTAAGATCCAGCTTCCTTGCGCTAAGTGTAAGGCGATTCTCAATGTTCCACATGGATTATCGCGGTTTTCGTGTCCGCAGTGTAATGTTGATCTTGCGGTTGATCTGTCGAAGGTTAAGCAGTTTTTACCTCCGCCGACGCTTGAAGAAGTTAACGAGGTTGCTGTTGAAGTGGAGCGAGATGAAGATGAAGGCGGCATGGCTGGAGAAACATTTACAGATTATCGACCACCAAAAGTATCTATTGGACCTCCACACCCAGACCCTGTTGTGGAGACATCTTCCTTGTCTGCAGTGCAACCACCGGATCCTACCTATGATCCAAAAACTAAAGATAATTTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACCTTGGTCTATGCTTGTCAGAGACACCTTCAGCACCTCCCCAGTGGAGCTAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGCAAAGGTCGAACAATTGCAGGTCTAATTTGGGAGAACTGGCACCATGGAAGGAGAAAAGCATTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGACGCTAGAAGAGACTTGGATGATGCGGGCGCAACATGTATTGAAGTGCATGCTTTGAACAAACTGCCCTATTCTAAGCTTGATTCAAAGTCTGTTGGGATCAAGGAGGGAGTTGTTTTCTTGACATACAATAGCCTTATAGCATCTTCAGAGAAAGGTCGTTCTCGACTCCAGCAGCTTGTGCAGTGGTGTGGACCAGGGTTTGATGGCCTTGTAATTTTTGATGAGTGTCATAAAGCAAAAAATTTGGTCCCTGAAGCTGGTAGTCAGCCAACACGAACCGGAGAAGCAGTGCTTGAAATTCAGGATAAACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCAACTGGTGCATCTGAACCTCGCAATATGGGTTATATGGTTAGACTTGGTCTTTGGGGAGATGGAACTTCTTTCTCCGAGTTCCGGGAATTTCTTGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGTCGGACACTTAGCTATGAGGGTGCTGAGTTTGAAGTTATTGAAGCGCCATTAGAAGATAAAATGATGGACATGTATAAAAAGGCAGCAGAATTTTGGGCAGAATTACGAGTAGAATTGCTGTCAGCTAGTGCCTTCCTAAATGATAAGCCTAACACTAGTCAACTATGGCGATTATACTGGGCAAGCCACCAGCGTTTCTTTAGACACATGTGTATGTCTGCTAAAGTACCTGCTACTGTAAGATTAGCAAAGCAAGCATTAGTTGATGGAAAATGTGTAGTCATTGGTCTTCAGAGTACTGGCGAAGCAAGGACAGAGGAAGCTGTGACAAAATATGGTTCTGAACTTGATGACTTTGTTTCTGGACCTCGGGAATTGCTGCTTAAATTTGTGGAAGAAAATTACCCGTTACCAGAAAAACCTCAACTCCTTCCAGGAGAGGATGGTGTTAAGGAGCTCCAAAGGAAGCGGCACTCCGCAACTCCTGATGTTTCATTAAAAGGAAGGGTCAGAAAATCAGCCAAGTTGCAGCCTCCTAGTGATGCAGAAAGCGACGAAGAATCTGAAACTGATTCAGGGATTGAATCTAATGACTCTGATGAGGAGTTTCAAATATGTGAAATTTGCACTACTGAGGAGGAAAGGAAAAAAATGCTACAGTGTTCCTGCTGTGGTAAATTAGTCCATTCCGCATGCTTGATGCCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAAAAAACAGATGAATACCTTCAAGCAAGGCAGGCCTACATAGCAGAAATGCAGAAGAGGTATGATGCAGCCTTGGAACGTAGGACAAAAATATTAGAGATCATTCGTTCGTTGGATCTTCCAAATAATCCTTTGGATGACATTACTGACCAGCTAGGGGGGCCAGATAAAGTTGCAGAAATTACAGGAAGGAGAGGCATGCTTGTGAGGGGCCCTGCTGGAAAGGGTGTAACTTATCAGGCTCGTAATACAAAGGAAGTTACCATGGAAATGGTTAACATGCATGAAAAACAGCTTTTTATGGACGGTAAAAAGTTTGTTGCTATTATCTCTGAAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGGAGAGCGGCAAATCAGAAAAGAAGAGTTCATTTAACGCTAGAGCTTCCATGGAGTGCTGACCGTGCAATTCAGCAGTTTGGAAGAACTCATAGATCAAATCAAGCTTCGGCACCAGAATACAGGATACTCTTTACTAATCTTGGTGGAGAACGACGATTTGCATCAATTGTTGCGAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGACCGCAGGGCTGGGCCTTCATTAAGTGCTTATAATTACGACAGTGCTTATGGAAAGAGGGCACTGATGATTATGTACAAAGGAATAATGGAGCAGGATTCTCTACCTGTCGTACCTCCGGGATGTTCATCTGACAGACCAGATACTGTTCAAGATTTCATTATTCAGGCAAAAGCTGCTCTTGTATCTGTTGGGATAGTTAGGGACTCGGTTCTCGGAAATGGTAAAGATTCTGGAAGGTTATCTGGTCGAATTATTGATTCAGATATGCACGAAGTTGGACGATTCCTTAACCGGCTTTTGGGACTACCTCCTGATATTCAGAATGGGCTATTTGAGTTATTTGTGAGTATCTTGGATCTTCTTGTTCGGAATGCTCGCATTGAAGGTAACCTCGACACGGGCATTGTTGACTTGAAGGCTAATGTCATTGAACTACAGGGGACTCCAAAGACAGTTCATGTTGATCAATTGACTGCGGCTTCTACCGTTTTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTCAGCAAGTAACATGCTGAATGAAAAACAAAAGGATGGGCTTGGCTCAGCCAATGATGGCTTCTACGAGTCCAAGAGGGAGTGGTTGGGAAAGCGTCATTTCATTTTAGCATTTGAAAGCTCTGCTTCGGGTATGTATAAGATTGTTCGGCCTCCCGTTGGGGAATCAAACCGGGAGATGCCTCTATCTGAATTAAAAAGTAAGTACAGAAAAGTTTCATCCTTAGAAAAGGCTCAAACTGGTTGGGAAGAGGAATATGAAGCTTCATCTAAACAGTGCATGCATGGTCCCAATTGTAAGATTGGCAACTTCTGTACAGTGGGTAGAAGACTACAGGAAGTGAATGTCTTGGGTGGCCTCATTCTTCCTGTTTGGGGAACCATAGAAAAGGCCCTTGCTAAGCAGGCTCGCCTAAGCCATAGGAGGCTACGTGTTGTACGCATAGAAACTACTGTGGATAACAAACGAATTGTTGGACTTCTTGTTCCTAATGCAGCTGTTGAAACTGTGCTTCAAGGTTTAGCATGGGTTCAAGAAATTGATGATTGA 3759 0.4491 MTSQPSIPSPPPPLPPPPASTAPPSDGGVRVRCAGCRMILTVAPGLTEFACPTCRMPQMLPPELMARVHQTAPPVTPPTQNLPAHGIDPTKIQLPCAKCKAILNVPHGLSRFSCPQCNVDLAVDLSKVKQFLPPPTLEEVNEVAVEVERDEDEGGMAGETFTDYRPPKVSIGPPHPDPVVETSSLSAVQPPDPTYDPKTKDNLESSKALSCLQIETLVYACQRHLQHLPSGARAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDAGATCIEVHALNKLPYSKLDSKSVGIKEGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLVIFDECHKAKNLVPEAGSQPTRTGEAVLEIQDKLPEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSEFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEDKMMDMYKKAAEFWAELRVELLSASAFLNDKPNTSQLWRLYWASHQRFFRHMCMSAKVPATVRLAKQALVDGKCVVIGLQSTGEARTEEAVTKYGSELDDFVSGPRELLLKFVEENYPLPEKPQLLPGEDGVKELQRKRHSATPDVSLKGRVRKSAKLQPPSDAESDEESETDSGIESNDSDEEFQICEICTTEEERKKMLQCSCCGKLVHSACLMPPIGDIVPEEWSCHLCKEKTDEYLQARQAYIAEMQKRYDAALERRTKILEIIRSLDLPNNPLDDITDQLGGPDKVAEITGRRGMLVRGPAGKGVTYQARNTKEVTMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMIMYKGIMEQDSLPVVPPGCSSDRPDTVQDFIIQAKAALVSVGIVRDSVLGNGKDSGRLSGRIIDSDMHEVGRFLNRLLGLPPDIQNGLFELFVSILDLLVRNARIEGNLDTGIVDLKANVIELQGTPKTVHVDQLTAASTVLFTFILDRGITWESASNMLNEKQKDGLGSANDGFYESKREWLGKRHFILAFESSASGMYKIVRPPVGESNREMPLSELKSKYRKVSSLEKAQTGWEEEYEASSKQCMHGPNCKIGNFCTVGRRLQEVNVLGGLILPVWGTIEKALAKQARLSHRRLRVVRIETTVDNKRIVGLLVPNAAVETVLQGLAWVQEIDD 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03199 1252 MobiDBLite consensus disorder prediction 1 27 - -
Mepo1g03199 1252 MobiDBLite consensus disorder prediction 599 630 - -
Mepo1g03199 1252 MobiDBLite consensus disorder prediction 631 647 - -
Mepo1g03199 1252 PANTHER STRAWBERRY NOTCH-RELATED 30 1246 IPR026741 GO:0006355
Mepo1g03199 1252 MobiDBLite consensus disorder prediction 599 647 - -
Mepo1g03199 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 418 IPR027417 -
Mepo1g03199 1252 ProSitePatterns Zinc finger PHD-type signature. 654 698 IPR019786 -
Mepo1g03199 1252 FunFam Protein strawberry notch homolog 2 205 405 - -
Mepo1g03199 1252 SMART PHD_3 653 699 IPR001965 -
Mepo1g03199 1252 Pfam PHD-finger 653 701 IPR019787 -
Mepo1g03199 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 902 IPR027417 -
Mepo1g03199 1252 ProSiteProfiles Zinc finger PHD-type profile. 651 701 IPR019787 -
Mepo1g03199 1252 Gene3D - 201 404 IPR027417 -
Mepo1g03199 1252 MobiDBLite consensus disorder prediction 148 201 - -
Mepo1g03199 1252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 705 IPR013083 -
Mepo1g03199 1252 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g03199 1252 Pfam P-loop containing NTP hydrolase pore-1 174 474 IPR039187 -
Mepo1g03199 1252 Pfam C-terminal domain on Strawberry notch homologue 742 1031 IPR026937 -
Mepo1g03199 1252 SUPERFAMILY FYVE/PHD zinc finger 644 704 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03199 Mepo-Chr1 36663518 36687318 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo1g03199 AAA_34 3e-132 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03199 K26273 - gmx:100808670 2227.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03199 1 36663518 36687318 Mepo1g03199 1 36663518 36687318 ECH