Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03196 ATGGGAAACTCGCAGGCGAAAAAGCGTGAAGCTGAATATTCTGGAAATATTGAAGCGAGAAACACTTCCAAAGTTGTCTCACCACGATCTAAACAAGAAGAAGAAGTGTCTTTCAATATTCATCATCATTACGGTAAGAAGAAGCTCTCTACGAAGGAGAAATATGCTTTAATTCCTGATAACTTTACTACTCTTCAACAGGTTACAAGTGCCTTGAGGAATGAAGGTTTAGAATCCTCGAATCTTATCCTTGGAATTGATTTTACGAAAAGCAATGAATGGACTGGCAGAAGCTCGTTTAATAATAAAAGCCTGCATTCTATTGGAGATACACCTAACCCTTATGAGAAAGCCATTTCTATTATTGGCAAGACTTTGGCTCCTTTTGATGACGACAACTTGATTCCTTGTCTCGGCTTTGGTGATGCTACAACTCATGATAGCGAAGTGTTTAGCTTTCATGCTGATGATTCATCTTGCCATGGATTTGAGGAAGTTCTGGCTTGCTATCAAAAAATTGTTCCAAACTTGAGTCTTTCGGGACCAACTTCATATGCACCGGTGATCGAGGCTGCTATAGACATTGTTGAGAAAACTCATGGCCAATTCCATGTGTTGGTTATTGTTGCAGATGGCCAGGTTACAAGATATGGCAACAATGATGATGCAAAACTCAGTCCTCAAGAAGAGAAGACAATAAAAGCAATAGTTGATGCAAGTTCATATCCTCTTTCTATTGTTCTGGTTGGAGTTGGTGATGGACCTTGGGAAGATATGAAAAAGTTTGATGACAAGTTACCTGCACGCGATTTCGACAATTTTCAGTTTGTTAACTTCACTGACATTATGTCTAAGAAAATAAGCCCTTCTGCAAAAGAAGCTGCTTTTGCTCTCGCTGCTCTTATGGAGATACCTTTCCAATATAAAGCAGCCCTTGAGCTCGGATTACTTGGTCGTGCAACGGGACGAGCAAAGAAAATGGTTCCAAGACCTCCTCCGGCTCCTTATTCTCGACATAAGCCACCAGATCATTTTCTGAGAAACATGCCAGCATCATCCATGGATGACCAGCGAAACCAAATGGAATGTGCTATATGTCTGACCAATAAAAAGGATTTGGCCTTTGGATGTGGTCACATGACCTGCAGAGATTGTGGATCAAGATTAAGCGATTGTCCGATATGCCGCCAAAGGATCACCAATCGCCTAAGGGTGTTTACCGGATGA 1227 0.4124 MGNSQAKKREAEYSGNIEARNTSKVVSPRSKQEEEVSFNIHHHYGKKKLSTKEKYALIPDNFTTLQQVTSALRNEGLESSNLILGIDFTKSNEWTGRSSFNNKSLHSIGDTPNPYEKAISIIGKTLAPFDDDNLIPCLGFGDATTHDSEVFSFHADDSSCHGFEEVLACYQKIVPNLSLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTRYGNNDDAKLSPQEEKTIKAIVDASSYPLSIVLVGVGDGPWEDMKKFDDKLPARDFDNFQFVNFTDIMSKKISPSAKEAAFALAALMEIPFQYKAALELGLLGRATGRAKKMVPRPPPAPYSRHKPPDHFLRNMPASSMDDQRNQMECAICLTNKKDLAFGCGHMTCRDCGSRLSDCPICRQRITNRLRVFTG 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03196 408 Pfam Zinc finger, C3HC4 type (RING finger) 360 400 - -
Mepo1g03196 408 SUPERFAMILY RING/U-box 357 402 - -
Mepo1g03196 408 MobiDBLite consensus disorder prediction 325 344 - -
Mepo1g03196 408 SMART ring_2 363 395 IPR001841 -
Mepo1g03196 408 MobiDBLite consensus disorder prediction 1 33 - -
Mepo1g03196 408 ProSiteProfiles Zinc finger RING-type profile. 363 396 IPR001841 -
Mepo1g03196 408 SMART VWA_4 79 282 IPR002035 -
Mepo1g03196 408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 350 407 IPR013083 -
Mepo1g03196 408 PANTHER COPINE FAMILY PROTEIN 1 25 383 - -
Mepo1g03196 408 Pfam Copine 104 317 IPR010734 -
Mepo1g03196 408 SUPERFAMILY vWA-like 80 263 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03196 Mepo-Chr1 36605253 36611921 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03196 1 36605253 36611921 Mepo1g03196 1 36605253 36611921 ECH