Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1093 ATGAAGTCCATGAATGACACTAGTAACTCTGATGACAGAAACAATCATAACAACAATTGGTTAGGTTTCTCTCTCTCACCCCACATTAAAATGGGAGAGATTTCTTCTTCTCATCATCATTACCAACAAACTCAAACTTCTTCAGTTTCCAACACTGTTCCTACTTCTTTCTATTTTTCACCTTCTCACTTCACCAACTCTACAATCTGTTATGGTGTTCCTGAAAATGGTAACAACTTTCATTCTCCTTTGACTGTTATGCCTATCAAGTCAGATGGCTCTCTTTGTATCATGGAAGCTCTTGGTAGATCACAATCACAAGTGATGGTGCCATCTTCATCTCCAAAACTAGAGGACTTTCTTGGTGGTGCAACAATGGGTAGTGATGAATATGGTAGCCATGAAAGTGAAGCAATGGCTTTAAGCTTAGACAGCATCTACTATAATAGCCAACAAAATGCAGATCCTCATGAAGCTAATAGAGACCATTCCCTTGAACTTCTTTCAGAATCTTTTAGAGAACAAACATCACATCCATATTATGCAGCACTTGGTTTCCATGGAATGTTTCAAGCACCATTAGAAGTAGAATCAAAAGTAAACACAAACCATGTTGATGTTTCTAGTTCCCAAATGCCTCAAAACTGGTATTCTGCTTCTCAGGCTTTAGAGCAGCAAATGAACACTACTAGTATGGGGAATAATAATGGTGGAGTTAGTGGTGGTTCTTCTGTGGTTGGTACTGTAGGGTGTGGTGAGTTGCAATCTTTAAGCCTTTCAATGAGTCCTGGTTCTCAATCTAGCTGTGTTACTGTTCCTAGACAGATCTCACCTTCTGGAACAGAATCTGTGACTGTGGATGCTAAGAAAAGAGGAGCTGCTAAGCTTGGACAGAAGCAGCCTGTTCATAGAAAATCTATTGACACTTTTGGACAGAGAACATCTCAGTATAGAGGTGTCACTAGGCATAGATGGACTGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAAGAAGGACAAACAAGAAAAGGAAGACAAGTATATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCAAGCAGCTCTTAAGTATTGGGGACCTTCAACACATATAAACTTTCCGTTAGAAAACTACCATACTCAGCTTGAGGAAATGAAAAACATGACAAGGCAGGAATATGTTGCACATTTGAGAAGAAAAAGCAGTGGATTCTCCAGGGGTGCTTCAATGTACAGAGGAGTGACAAGACACCACCAACATGGTAGGTGGCAAGCTAGGATTGGAAGAGTTGCTGGTAACAAAGACCTTTACCTTGGAACATTCAGCACTCAAGAGGAAGCAGCAGAAGCATATGATGTAGCAGCAATAAAATTCCGTGGAGCAAATGCTGTCACAAATTTTGACATATCTAAATATGATGTTGAAAGTATCATGGCTAGCAATACTCTTCTTTCTGGTGAGCATGCAAAGAGGAAAAAAGATAACAAACCGAGAACCGAAGTTCAGGAATATAATATCGGTACTAATGTATCGAGTCAGAACAATGGAGAAGCAGCTCAAGCGCGAGACAACAACGAAAATGATTCGAATTGGAAGATGGTATCAAATAGCTGTGACCAAAAAAATATTGTGAACTCTTGTGGAAGTTACAAGAATTCTGATTTCTCTATGTCATTACAAGATCTTGTTGGTATTAATTCAGTTGGTTTGGATGATTCTACCAAAATTGGGACACATTTTTCTAATCCATCATCATTGGTGACAAGTTTAAGCAGTTCTAGAGAAGCTAGTCCTGATAAAACTGCTCCCTCACTACTCTTTCCAAAGCCTTCAATGGAATCAAAAATTGCTACTAATGGTGTTGGTGTTAGTTCTTGGTTTCCTTCACAAGTAGCAACTCAAATGAGGCCAGCTTCTTCTATCAATTTGTCACATTTCCCAGTTTTTGCTGCATGGAATGAGACCTAG 1992 0.3931 MKSMNDTSNSDDRNNHNNNWLGFSLSPHIKMGEISSSHHHYQQTQTSSVSNTVPTSFYFSPSHFTNSTICYGVPENGNNFHSPLTVMPIKSDGSLCIMEALGRSQSQVMVPSSSPKLEDFLGGATMGSDEYGSHESEAMALSLDSIYYNSQQNADPHEANRDHSLELLSESFREQTSHPYYAALGFHGMFQAPLEVESKVNTNHVDVSSSQMPQNWYSASQALEQQMNTTSMGNNNGGVSGGSSVVGTVGCGELQSLSLSMSPGSQSSCVTVPRQISPSGTESVTVDAKKRGAAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYHTQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISKYDVESIMASNTLLSGEHAKRKKDNKPRTEVQEYNIGTNVSSQNNGEAAQARDNNENDSNWKMVSNSCDQKNIVNSCGSYKNSDFSMSLQDLVGINSVGLDDSTKIGTHFSNPSSLVTSLSSSREASPDKTAPSLLFPKPSMESKIATNGVGVSSWFPSQVATQMRPASSINLSHFPVFAAWNET* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1093 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 661 - -
Mal2g1093 663 SMART rav1_2 316 388 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 SMART rav1_2 418 482 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 CDD AP2 417 478 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 661 - -
Mal2g1093 663 SUPERFAMILY DNA-binding domain 417 478 IPR016177 GO:0003677
Mal2g1093 663 CDD AP2 315 382 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 MobiDBLite consensus disorder prediction 260 304 - -
Mal2g1093 663 Pfam AP2 domain 419 468 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 Pfam AP2 domain 316 374 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 ProSiteProfiles AP2/ERF domain profile. 418 476 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 Gene3D AP2/ERF domain 418 478 IPR036955 GO:0003700|GO:0006355
Mal2g1093 663 Gene3D AP2/ERF domain 315 384 IPR036955 GO:0003700|GO:0006355
Mal2g1093 663 MobiDBLite consensus disorder prediction 260 284 - -
Mal2g1093 663 PRINTS Ethylene responsive element binding protein signature 317 328 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 PRINTS Ethylene responsive element binding protein signature 458 478 IPR001471 GO:0003700|GO:0006355
Mal2g1093 663 SUPERFAMILY DNA-binding domain 315 384 IPR016177 GO:0003677
Mal2g1093 663 MobiDBLite consensus disorder prediction 515 538 - -
Mal2g1093 663 ProSiteProfiles AP2/ERF domain profile. 316 382 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1093 Mal-Chr2 12751428 12754629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1093 1 499 AP2-EREBP Transcription Factor Family AT4G37750 54.049 2.06e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mal2g1093 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1093 K09285 - gmx:100798179 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1093 2 12751428 12754629 Mal2g1093 2 12751428 12754629 ECH
Mal1g5671 1 133064466 133068443 Mal2g1093 2 12751428 12754629 PCT