Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5688 ATGGAAAAGATCAAAGTGAAGTATCAACTCAAAAACGAAGATTGGAAACCTTCACCAATTACAGCTTTAGCTACTAGCATCGACGGTACACGCGTCGCTGCTTCAAGAGAAGATGGTTCTTTAGAGCTTTGGCTTGTTTCTCCTAATACTATTGGTTGGCACTGTCAATTGACAATTCATGGAGATCCTAACAGAATTGTTTCCTCGTTGATTTGGTGTCCTGGTGGTGGATTTCCTCATGGTCGTTTGTTTTCATCTAATATTGATGGTTCTCTTTCTTTTTGGGATCTCCAACACTTGAAACAAACGATGGTGCTTGAATCTACTGGTGTCTCAATCTGGAAAATGGCCGTGACGCTGGCTAAAAGTGATGATGTTGAAACTAATGGTCATCATATAGGGAATGGTTATTTGAAGAATTCTCATGATTCGGATGAAATGGAGAACAGTGAAAGCGATGAAGATTCCGATTCACCGGATGTTCTTAAGCAATCCAGTTTAGTGGAGCCAAGAGTCGCAGTTGCTTTTGATGATGGATGTGTTAAAATTTACACTATATCTGATGCAAATGAATTTATATATTTAAAATCCCTGAACCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACGGATGCTAAATTCATATGTTCTGGAAGTAGTGATGGGAGAATACGAATCTGGAATGCCAAATCAGGTATTGAAGCCCATAATATGTCAGCTGGACTGGGTAGGGACAGTGGACATGAACTTTGTATATGGTCATTACTCTATTTAAGGTCTGGGATACTTGTTAGTGGAGACAGCAGTGGTAGTGTCCAGTTTTGGGATTGCCGAGAAGGAGCTCCCTCTCAACAACCTATTACTAAACACAAGGGAGATGTACATGCTTTGGCAGTAGCCCCTGATCACAATATGCTGTTCTCTGCCGGTGCCGATGGACAGGTTATTCTTTATAAGCTGTCTGAGTCAACAATAGAGAAAGAGAAATGGATCTACGTTGATTATGAAGTAGCTAATAAACTTGACGCCCGAGCCTTGACTGTTGCTGTGCCGATAAGTCAAGAAGATTCTTTGCCAGATGAAAGGATTAAAAGAGCTCGTCGTAGAAAAAAGCCAGATGATTCTTCTAGTTACCACAAATGGGCTCATTCGGGGCATCCCATGCTTATCTCAGCAGGAGATGACACAAAACTCTATGCATACCCCGTAAAAGAATTCACCAATTTTAAAGCTCATTGTATCTGTCCTGTGCCTCAGAGAACACCCATTCAAGTAGCACTTAATACTTCCTTCAATCAATCACCAATGCTTTTACTGCAGTCTTCGCATTGGATAGAAGTCCGTTTGCTACATCTCAGAAATGTTCGCAGAACTGGAGACTATGCAAAGTCTGAAACTGTTGGCCGATTCAAGATTAAGGCATCTCGTAAGATAATTTGTAGCACCCTTGCTAATTCAGGGGCGTTTTTTGCGTATTCTGATAATGAAAAGCCTGTTCTTTATAAAGTGGAGAGATCTGAAGCAGGAAAAATTACATGGAGTTTTGGTAAAAGGAAGCTTCCTGAGAGATTACCATTTGCGCATTCAATGATATTTTCTCATGATTCCTCTTGGTTGATAGTAGCTGGCTATGACAGAAGGATATATGTTGTGGATGCCAATAGCTCGGAACTAGTACATACTTTTACACCCTTCCGTGAACTGCAAGATGATGGATTATCACCAACCGAACCACCCATCACAAAATTGTTTACTAGTTCTGATAAGCAGTGGTTGGCCGCCGTGAATTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAGCACTGGTTCATTTCAAGATTGGATGGTGCCTCTGTTACAGCTTGTGGATTTCCGCCCCAAAACAACAATGTACTGATAGTTACAACAACTTCAAATCGAGTGTATGCATTTGACGTAGAAGCCAGGCAATTGGGGGAATGGTCGGTGTGGAATACATTTGTTCTTCCTAGGAGATTTCATGAATTTCCTGGTGAAGTCATTGGGCTTTCATTCCCTCCCTCGTCGACTTCATCTTCGGTGATGGTTTATAGCTCCAGGGCAATGTGCTTGATTGATTTTGGCTTGCCTGTGGAGCAAGATGAAGGTGAAATGTTACATATTCGAGATTCAATGGTCAAGAATTCGCCAAATTTTAACGTTAAGAAACGGACCAAATTTAGGAAGAACGTTGAAGTTTTGCCGAAGAGCTTTGAAAACTTTGAAGTTTTGCCGTTCGAAAAAGATCGTGTCTTATATCTATCACATATTTCAAATAATCACTTCTTTATGATTGAAAAACCCTGGTCCGATGTGGTCAATAGTTTAGATGTTCAACCAGTCCACAGACATATTTATGGGACATAG 2403 0.4082 MEKIKVKYQLKNEDWKPSPITALATSIDGTRVAASREDGSLELWLVSPNTIGWHCQLTIHGDPNRIVSSLIWCPGGGFPHGRLFSSNIDGSLSFWDLQHLKQTMVLESTGVSIWKMAVTLAKSDDVETNGHHIGNGYLKNSHDSDEMENSESDEDSDSPDVLKQSSLVEPRVAVAFDDGCVKIYTISDANEFIYLKSLNRVKGRVLSVTWSTDAKFICSGSSDGRIRIWNAKSGIEAHNMSAGLGRDSGHELCIWSLLYLRSGILVSGDSSGSVQFWDCREGAPSQQPITKHKGDVHALAVAPDHNMLFSAGADGQVILYKLSESTIEKEKWIYVDYEVANKLDARALTVAVPISQEDSLPDERIKRARRRKKPDDSSSYHKWAHSGHPMLISAGDDTKLYAYPVKEFTNFKAHCICPVPQRTPIQVALNTSFNQSPMLLLQSSHWIEVRLLHLRNVRRTGDYAKSETVGRFKIKASRKIICSTLANSGAFFAYSDNEKPVLYKVERSEAGKITWSFGKRKLPERLPFAHSMIFSHDSSWLIVAGYDRRIYVVDANSSELVHTFTPFRELQDDGLSPTEPPITKLFTSSDKQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTACGFPPQNNNVLIVTTTSNRVYAFDVEARQLGEWSVWNTFVLPRRFHEFPGEVIGLSFPPSSTSSSVMVYSSRAMCLIDFGLPVEQDEGEMLHIRDSMVKNSPNFNVKKRTKFRKNVEVLPKSFENFEVLPFEKDRVLYLSHISNNHFFMIEKPWSDVVNSLDVQPVHRHIYGT* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5688 800 Gene3D - 7 146 IPR015943 GO:0005515
Mal1g5688 800 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 198 234 - -
Mal1g5688 800 MobiDBLite consensus disorder prediction 361 382 - -
Mal1g5688 800 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 17 238 IPR011047 -
Mal1g5688 800 SUPERFAMILY WD40 repeat-like 170 656 IPR036322 GO:0005515
Mal1g5688 800 Pfam Anaphase-promoting complex subunit 4 WD40 domain 173 243 IPR024977 -
Mal1g5688 800 Gene3D - 488 712 IPR015943 GO:0005515
Mal1g5688 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 289 330 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 3 45 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 519 554 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 240 278 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 282 321 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 613 651 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 52 96 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 191 230 IPR001680 GO:0005515
Mal1g5688 800 SMART WD40_4 99 185 IPR001680 GO:0005515
Mal1g5688 800 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 6 800 IPR044622 GO:0010073|GO:0035266
Mal1g5688 800 ProSitePatterns Trp-Asp (WD) repeats signature. 217 231 IPR019775 -
Mal1g5688 800 Gene3D - 161 419 IPR015943 GO:0005515
Mal1g5688 800 MobiDBLite consensus disorder prediction 132 162 - -
Mal1g5688 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 198 239 IPR001680 GO:0005515
Mal1g5688 800 Pfam WD domain, G-beta repeat 289 320 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5688 Mal-Chr1 133503536 133509851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5688 196 323 Acyl Lipid Metabolism Gene Families AT3G18860 31.783 6.24e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5688 K14548 - gmx:100797494 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5688 1 133503536 133509851 Mal1g5688 1 133503536 133509851 ECH