Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5687 ATGGCAGTGTTATCGGAGATAGAAGAAGATGAACTGGACGAAGAACCAGGTGAGGTCATCGAGTCAGCACCGCCTCAAAAGCTCGGCGAAGAAAGACAACTCAATTCCAACTCTCCGATCAAAAAGAAGCTCCTCAAACGCGGTCACGGTTGGGAAACCCCAAACTTCAACGATCATGTTACTCTTCATTATGTTGGAACTTTGCTTGATGGAACGAAATTGGGTTCCACTAGGGATTCTGATTGTCCTGTCACATTTTCACTTGGCCAAGGTGAAGTGTATGCTGGATTGGATAATGGGATTGTCACCATGAAGAAAGGAGAGGTGGCATTGTTCACATTACCTGCTGCTGAGTCTGGAGGCATTCCACAAGACTCCAACTCGGTTGTACAATTTGAGGTGGAACTCGTTTCTTGGATCACGGTGGTGGATGTTTGCAAAGATGGTGGAATTATCAAGAAAATTATGGAGAAGGGGAAAGGAAATGATCGGCCCGGTGATCTTGATGAAGTCCTTGTAAAGTATAAGGTGGCACTAGTAGATGGCGCTGTTGTTGCAGAAACACCGGAAGGAGGAGTTGAATTCTATGTGAAGGATGGTCATCTACTTCCTAGATTGCAGAAAGTGATCATGACTATGACAAGGGGAGAGAAGGCTGAATTAATTGTTCAACCTCAGTATGCCTTTGGGGAGAAGGGGAAAGAAGCTGCCGGGTTCCATTCAATTCCCCCAGACTCAGTGCTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTATTGGTGACTCCATGGTGGTTAAGAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAGGGTGCAAATGTTACTGTCAGCTACACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGAGGAATTGATGAAACGCAACCCTTGAAATTCATAACTGATGAGGAACAAGTGATTACTGGTCTAGACCGAGCAGTGGCAACAATGAAGAAGGGTGAGAGGGCCATAATTAGCATACATCCTGATTATGCATTTGGAAATGTTGAAGTGAAACAAGATCTGGCTATCGTGCCGCCAGGCTCAAAAGTAGTGTATGACATTGAAATGATGGACTTCATAAAGGAGAAAACACCATGGGAGTGCAATTGTAATGAGAAAATTGAGGTGGCTGGGAGGAAGAAAGAAGAAGGGAATTTATTATTTAAAACTGGAAAATATCAGCGAGCAGGGAAGAAGTATGAAAAGGCTGCTGATTTTGTTAGTGAAGATGGATCCTTTGGGGATAATGAGCAAAAGCTAGCTAAATCGTTGAGAGTTTCATGTTGGTTGAATGGTGCAGCTTGTTGCCTTAAACTGAATGACTTTCCTGGAGCAATCAAACTATGTACACAGGTGCTTGATGTTGAGTTTCACAATGTGAAAGCTTTGTATAGACGGGCGCAAGCATATATAGAGACCGGAGACTTTCTTTTGGCAGATGTAGACATCAAGAAAGCTCTTGAGGTGGATCCACAAAACAGGGAGGTAAAGGTACTGAAGATTAAATTAAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAACTGTATGAAAATATGTTTGCGCCTAAAACCAAGAGATTGAAGGTTGAGAAAGAAGAGGATGAGGTGGCGAAAATGGAAATGGACAATGTTGGTGACAGCACAGCTGCTTCTGATGGTGGTTTAACTATTGATTGTTGA 1740 0.4282 MAVLSEIEEDELDEEPGEVIESAPPQKLGEERQLNSNSPIKKKLLKRGHGWETPNFNDHVTLHYVGTLLDGTKLGSTRDSDCPVTFSLGQGEVYAGLDNGIVTMKKGEVALFTLPAAESGGIPQDSNSVVQFEVELVSWITVVDVCKDGGIIKKIMEKGKGNDRPGDLDEVLVKYKVALVDGAVVAETPEGGVEFYVKDGHLLPRLQKVIMTMTRGEKAELIVQPQYAFGEKGKEAAGFHSIPPDSVLHVNIELVSFKPVINVIGDSMVVKKILKEGEGAFTANEGANVTVSYTAMLEDGTVFEKRGIDETQPLKFITDEEQVITGLDRAVATMKKGERAIISIHPDYAFGNVEVKQDLAIVPPGSKVVYDIEMMDFIKEKTPWECNCNEKIEVAGRKKEEGNLLFKTGKYQRAGKKYEKAADFVSEDGSFGDNEQKLAKSLRVSCWLNGAACCLKLNDFPGAIKLCTQVLDVEFHNVKALYRRAQAYIETGDFLLADVDIKKALEVDPQNREVKVLKIKLKQLQADSDKKDAKLYENMFAPKTKRLKVEKEEDEVAKMEMDNVGDSTAASDGGLTIDC* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5687 579 Gene3D - 143 259 IPR046357 GO:0003755
Mal1g5687 579 SMART tpr_5 444 477 IPR019734 GO:0005515
Mal1g5687 579 SMART tpr_5 395 428 IPR019734 GO:0005515
Mal1g5687 579 SMART tpr_5 478 511 IPR019734 GO:0005515
Mal1g5687 579 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 165 255 IPR001179 GO:0003755
Mal1g5687 579 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 137 IPR001179 GO:0003755
Mal1g5687 579 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 282 374 IPR001179 GO:0003755
Mal1g5687 579 Gene3D - 260 380 IPR046357 GO:0003755
Mal1g5687 579 Gene3D - 32 140 IPR046357 GO:0003755
Mal1g5687 579 PANTHER PEPTIDYLPROLYL ISOMERASE 377 559 - -
Mal1g5687 579 MobiDBLite consensus disorder prediction 1 18 - -
Mal1g5687 579 Gene3D Tetratricopeptide repeat domain 381 538 IPR011990 GO:0005515
Mal1g5687 579 SUPERFAMILY FKBP-like 144 258 - -
Mal1g5687 579 PANTHER PEPTIDYLPROLYL ISOMERASE 5 264 - -
Mal1g5687 579 PANTHER PEPTIDYLPROLYL ISOMERASE 266 378 - -
Mal1g5687 579 SUPERFAMILY TPR-like 390 540 IPR011990 GO:0005515
Mal1g5687 579 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 286 378 IPR001179 GO:0003755
Mal1g5687 579 Coils Coil 514 534 - -
Mal1g5687 579 ProSiteProfiles TPR repeat profile. 478 511 IPR019734 GO:0005515
Mal1g5687 579 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 264 - -
Mal1g5687 579 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 266 378 - -
Mal1g5687 579 Pfam Tetratricopeptide repeat 479 511 IPR019734 GO:0005515
Mal1g5687 579 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 377 559 - -
Mal1g5687 579 SUPERFAMILY FKBP-like 35 141 - -
Mal1g5687 579 SUPERFAMILY FKBP-like 265 394 - -
Mal1g5687 579 MobiDBLite consensus disorder prediction 1 39 - -
Mal1g5687 579 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 140 IPR001179 GO:0003755
Mal1g5687 579 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 168 258 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5687 Mal-Chr1 133495790 133501915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5687 27 541 Calmodulin-binding Proteins AT3G25230 54.789 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5687 K09571 - gmx:100798382 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5687 1 133495790 133501915 Mal1g5687 1 133495790 133501915 ECH