LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g5680	ATGGAAAAAATCTGCGTCGCCGTTAGAGTTCGTCCTCTCGTTTCTTCAGATTCCGTCAATGGAAGCTTCTGGAAGGTCGATGATAACCGTATTTCTCTTCACAAGATCCATGGAACTCCACTCTCTAACTCTTCTTATGCTTTCGATCATGTGTTTGATGAATCTAGCTCGAATTCGAGTGTTTATGAGGTTCTCACTAAGGATATCATTCTCGCTGCTCTCAATGGCTTCAACGGGACTGCATTTGCTTATGGACAGACAAGCAGTGGGAAGACGTTCACGATGAATGGCTGTGAGACTGACCCGGGAGTGATTCCTCGGGCAGTCAAAGATATATTTGCAAAAATTGAGACGATGTTTGAACGGGAGTTTTTAATTCGAGTTTCGTACATGGAGATTTATAATGAAGAGATCAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGCCTTGAGAGGGGAGTATTTGTTGCTGGACTCAGAGAGGAAATTGTCAATAATGCTGAACAAGTTCTAAATCTCCTTAAAGTAGGAGAAGTGAATAGGCACTTTGGTGAAACAAATATGAATGTAAGGAGTAGCAGATCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGATTCCAATTCTTCCGATGATAGTTCAATAAGTGACATTGTTCGAGTTTCAGTCTTGAATTTAGTAGATCTTGCTGGCTCTGAAAGGATTGCAAAGACTGGAGCTGATGGAGTACGTTTGAAAGAAGGAAAATACATTAACAAGAGCTTGATGATTCTAGGAAATGTTATTAATAAATTAAGTGAGGGTTCAAAACATAGGGGACATATCCCATATCGTGATAGTAAATTAACACGTATACTCCAACCTGCTCTTGGTGGAAATGCCAAAACATCCATTATTTGCACTGTAGCACCAGAAGAGGTTCACATTGAAGAAACAAAGGGAACTCTTCAGTTTGCTAGTAGAGCCAAACGCATCACCAATTGTGTTCAAGTGAATGAGATTCTAACAGATGCAGCCTTGTTAAAGCGGCAACAGTTAGAGATAGAAGAGCTACGTAAGAAACTTCAGGGATCTCATGCTGGGGTGCTCGAGCAAGAGATTCTTAAACTCAGGAACGATTTGCTCAAGTATGAAATGGAGCGTGGTAAGCTTGAAATGGAACTGGAAGAGGAGAGGAAATCGCGCAATCAATGGATTAGCGAGCAACAGATGAAAATTGAAAATTCCAGTACTACATCATTCTCAGTCTCAGATTGTGGGACGAACGACAATCAGGGACCAAGATATTTGAGGCGAGGATTGATTGAGGAGTACAGTGACATTAATAGTACATCTCAAGGAGATATGTTTAAATCTCCCTGTTTAAAGACAGCCAGTGCTTTTGTTGTCAAGCGATCAAGGAATTCAACATTGCCAGATAGTAGTCCTCCTCTTCCAGAAGCTTTCAGCAATGTGGCTGATGAAGATATGTGGTTGAAAATGAACAATGGCTACGTTGCGGACCTTGATTTGCTTCAAATAACTCCCACTCGAAATATTCAATCATTCCCACTAAGTGATACAACTCCTGGTTGTATAAGTCAAACTGCAAAGTATGAAAGAGAGGTTCAAGATTTGAGAAGACAACTAGAGCTTGCAAATGAAAAGATAAATGAACTGGAGAGAAAGCATTCAGAGGAAATACTGTCAAGCAAGCAATTAATAGTCGAGAGCCCAAACAATCAACATGAAACACAACTAATTCAAGAATTGCCTCTGAAGTTATCGGAATCTGTGGGAAACTATAAAGATAGCTTTGAGGAGGTTTTATCAGTAATGCAGAGATTTGCATTGGATGGAAAAGTCTCAACTGATAAGATGCTTTCAACCATGAGTGAAATTGGTGCACAGCTTTTTTCAACTTTGGAAGGTCACTTTTCCACTGGAAACTATGCTGCAATCCAGGAACAACAAAAAGAGTTTCATGAGAAGATGAATAATATAATTACATCACTAGAGTTATCAGAAAGCTCAGTAACAGGAAATCAAGAGAGGACTCCTTTGTGCAGCTGTGAACACAAGGGCTCTGAATTGGGAGGAGAAACAGAAATTGCTTACTCAAAGGATGCTTTCAATGAAAGATACGAAAGCCTCGAAAGGGAGTTACAACTTTTGAAGAATGAAAGAGACTCTTTGCTACAAAAGTTCTCTGAATCGTCTGATAAACTTGCAATGGTTTCAAGCCAAAAGGAAAATACATTGAAAGATTTAAATACTGAAGTACAGAGAAGGAAAAATCTAGAAGGAGAGGTTAAGCAATTCACTGCAGCTTTTCTCTGTCGTCAGAAATTGCTTATTTCCTTGCGTGGCGATCTTAAGACCAAAATTGAGAAATGGAAATCCCAGACACCAATTTCATTGTCAAAGTCTTTTGGGTGTCAGGACTAG	2451	0.3941	MEKICVAVRVRPLVSSDSVNGSFWKVDDNRISLHKIHGTPLSNSSYAFDHVFDESSSNSSVYEVLTKDIILAALNGFNGTAFAYGQTSSGKTFTMNGCETDPGVIPRAVKDIFAKIETMFEREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVAGLREEIVNNAEQVLNLLKVGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKDSNSSDDSSISDIVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMILGNVINKLSEGSKHRGHIPYRDSKLTRILQPALGGNAKTSIICTVAPEEVHIEETKGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRKKLQGSHAGVLEQEILKLRNDLLKYEMERGKLEMELEEERKSRNQWISEQQMKIENSSTTSFSVSDCGTNDNQGPRYLRRGLIEEYSDINSTSQGDMFKSPCLKTASAFVVKRSRNSTLPDSSPPLPEAFSNVADEDMWLKMNNGYVADLDLLQITPTRNIQSFPLSDTTPGCISQTAKYEREVQDLRRQLELANEKINELERKHSEEILSSKQLIVESPNNQHETQLIQELPLKLSESVGNYKDSFEEVLSVMQRFALDGKVSTDKMLSTMSEIGAQLFSTLEGHFSTGNYAAIQEQQKEFHEKMNNIITSLELSESSVTGNQERTPLCSCEHKGSELGGETEIAYSKDAFNERYESLERELQLLKNERDSLLQKFSESSDKLAMVSSQKENTLKDLNTEVQRRKNLEGEVKQFTAAFLCRQKLLISLRGDLKTKIEKWKSQTPISLSKSFGCQD*	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g5680	816	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	364	IPR027417	-
	Mal1g5680	816	ProSitePatterns	Kinesin motor domain signature.	230	241	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Mal1g5680	816	PANTHER	CENTROMERE PROTEIN E	2	777	-	-
	Mal1g5680	816	Coils	Coil	368	402	-	-
	Mal1g5680	816	PANTHER	CENTROMERE PROTEIN E	2	777	-	-
	Mal1g5680	816	Pfam	Kinesin motor domain	9	333	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	ProSiteProfiles	Kinesin motor domain profile.	3	333	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	PRINTS	Kinesin heavy chain signature	76	97	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	PRINTS	Kinesin heavy chain signature	231	249	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	PRINTS	Kinesin heavy chain signature	191	208	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	PRINTS	Kinesin heavy chain signature	283	304	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	Coils	Coil	709	743	-	-
	Mal1g5680	816	SMART	kinesin_4	1	341	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal1g5680	816	CDD	KISc_CENP_E	3	333	-	-
	Mal1g5680	816	Gene3D	Kinesin motor domain	1	365	IPR036961	-
	Mal1g5680	816	Coils	Coil	537	571	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g5680	Mal-Chr1	133273688	133280464	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g5680	2	395	Miscellaneous Gene Families	AT4G39050	45.250	8.79e-94	315

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g5680	K11498		-	gmx:100804944	1215.29

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g5680	1	133273688	133280464	Mal1g5680	1	133273688	133280464	ECH