Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5678 ATGGCGAATAATCCTCAACAACCTTCTGGTATTCAGTTTCGGCCAGTCATTCATACGCAGCAAGGGCCACCATTTGTTCCAATGACTTCACAACAATTTGGACATGCAGGGCATGCCGTTCCTTCGTCTAATGTCGGGATGCCGGCTATTCAGGGTCAGCAATTGCAGTATTCTCAACAAATGCAACAGTTGGCTCCAAGACAAATTCAGCCTGGTCATCCTGTTTCATCATCACAGGGTATACCTATGCCATATATTCAAACAAACAGGCCACTGACATCTGTTCCACAACATGCACAGCAAGCTGTTCCTCACATAAACAGTCATATGCCTGTATCAGGAGCACCTCCTCAATCTTTGTATACTTTCACACCATCTTATGGTCAGCAGCCAGACAATGCTAATGCATTACCCCAATACCAGCATCCGCCTCAAATCCATGCACCTCCTGTCGGACAACCTTGGTCGTCCTCAGTACCTCAGAGTGCTGCAGCTGTTACCACAGTACAGCCGGCTGGAGTTCAATCATCTAGTACTGCATCAAATGATGCTGCAACAAATACCACTAACCACAACTCTGCATCAGATTGGCAAGAGCATACTGCTGCTGATGGGAGAAGATATTACTACAACAAGAGTACAAGGCAATCTAGTTGGGAAAAACCTTTGGAGTTGATGTCACCTCTTGAGAGGGCTGATGCATCAACTGTCTGGAAAGAGTTCACTTCTTCAGAGGGAAAAAAGTATTATTACAACAAGATTACTCAGCAATCAGTATGGACAATACCAGAAGAACTCAAGTTGGCCCGTGAGCAGGCACATAAAACTATTAGCCAGGGAGTGGTGTCAGAAACAAGTGATACATCCAATGCTGCTGCCTCCTCTGCTGCAACATCAACACCAGCTAATGCAGCTAGCTCCAACACTTTGACATCTAATGGTCTTGCTGCAAGCCCATCTTCTGTTACGCCAGTTGTTGCCACTGATAATCAACGGTTGATTTCTGGATTATCGGTGGCCTCTGTTTCCCATCCTGTAGTTGCTTCAAGCACCACAGGAGTCGAACCAAGCACTGTTGTAACTGTGAGCACTGCACCTACAACAGTTGCAGGAAGCTCAGGAGTAGCAGCCAATTCACTTGATTCAAAAATTCCATCCATTGTTGAAAATCAAACAACTCATGATTCTATTTCTTCTGTCAATGGAGCACCTCTTCAAGATATGGAGGAAGCCAAAAAAGGAGTTCCTGTGGTTGGACAAACTAATGTGACTCCTTCAGAGGAGAAAACCAATGATAGTGAAACTTTGGTATATGCAAATAAGCTGGAAGCAAAAAATGCATTCAAAGCGCTTCTGGAATCTGTGAATGTTCATTCTGATTGGACGTGGGAACAGGCAATGAGAGAAATCATCAATGATAAAAGATATAATGCCCTGAAAACACTTGGTGAGCGAAAACAAGCTTTCAATGAGTATTTGGGACAAAGGAAGAAGCTAGAGGCTGAAGAGAGGCGCATAAAGCAGAAAAAAGCCCGCGAAGAATTCACAAAGATGTTAGAAGAGTGCAAGGAGCTAACATCATCCACAAGATGGAGCAAAGCTGTAAGTCTGCTTGAAAATGATGAGCGATTCAATGCTGTTGAAAGACTAAGAGATCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAAATGCTGCCGAGGAACACCGGCGGAATTTAGCAGAATATAGGAAATTTCTGGAATCTTGTGATTTTGTGAAGGTGAACAGCCATTGGCGTAAAATCCAAGATCGGCTAGAGGATGATGATAGATACTTACTACTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGACTTGGAGAAGGAGGAAGAGGAACAAAAAAAGATACAGAAGGAACGAGTCCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTGGAAGAACATGTTGCTGATGGAATTCTTACTGCTAAAACACAATGGCGAGATTATTGCTTGAAGGTGAAGGAGTTGCCTCAATATCAAGCTGTTGCATCAAATACATCTGGTTCCACCCCAAAAGATTTATTTGAGGATGTCTTAGAAAATCTTGAAAAGCAGTATCATGAAGATAAGACACTCATAAAAGATACACTTAAGTCGGGCAAGATCACCGTAGTGACTACGTCAGTATTTGAGGACTTCAAGTCTGCTGTATTAGAAGAAGCTGCTTGCCAAGCGATATCAGAGATTAATTTGAAGCTTTTATTTGAAGAGTTATTAGAGAGAGCGAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGACTTTACTAACTTGTTATATACACTCAAGGATATTATTACTTCTTCAACATGGGAGGATTGCAAGCCACTTTTTGAGGACACACAAGAATACATGTCAATTGGAGATGAAAACTATAGTAAAGAAATTTTTGAGGAATACATTACATACCTGAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAAGAAAAGGCCAAAAAGGAGAAAGAAAGAGAAGAGAAAGAAAAACGTAAAGAGAAGGAGAAAAAAGAGAAGGAAAGAGAACGTGAGAAAGAAAAATCAAAAGAACGACATAAGAAAGATGAATCAGATAGTGATAATCAAGACATGACTGACAGCCATGGTTATAGAGAGGAGAAGAAAAAAGAAAAGGATAAGGATAAGGAAAGAAAACACCGGAGAAGACATCAGAGCAGTATAGAGGATGTAGATTCTGAAAAGGATGAGAAGGAAGAGTCTAGAAAATCGCGAAGACATGGAAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTCCTGAGTCAGACAATGAAAGTCGGCATAAAAGACACAAGAGGGACCACGGGGATGGTTCCAGGAGAACTGGATGGAATGATGAGCTTGAAGATGGGGAGCTCGGCGATGATGGAGAGGTTTAG 3009 0.4224 MANNPQQPSGIQFRPVIHTQQGPPFVPMTSQQFGHAGHAVPSSNVGMPAIQGQQLQYSQQMQQLAPRQIQPGHPVSSSQGIPMPYIQTNRPLTSVPQHAQQAVPHINSHMPVSGAPPQSLYTFTPSYGQQPDNANALPQYQHPPQIHAPPVGQPWSSSVPQSAAAVTTVQPAGVQSSSTASNDAATNTTNHNSASDWQEHTAADGRRYYYNKSTRQSSWEKPLELMSPLERADASTVWKEFTSSEGKKYYYNKITQQSVWTIPEELKLAREQAHKTISQGVVSETSDTSNAAASSAATSTPANAASSNTLTSNGLAASPSSVTPVVATDNQRLISGLSVASVSHPVVASSTTGVEPSTVVTVSTAPTTVAGSSGVAANSLDSKIPSIVENQTTHDSISSVNGAPLQDMEEAKKGVPVVGQTNVTPSEEKTNDSETLVYANKLEAKNAFKALLESVNVHSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSKAVSLLENDERFNAVERLRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDFVKVNSHWRKIQDRLEDDDRYLLLEKIDRLLVFQDYIRDLEKEEEEQKKIQKERVRRGERKNRDAFRKLLEEHVADGILTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVLENLEKQYHEDKTLIKDTLKSGKITVVTTSVFEDFKSAVLEEAACQAISEINLKLLFEELLERAKEKEEKEAKKRQRLADDFTNLLYTLKDIITSSTWEDCKPLFEDTQEYMSIGDENYSKEIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKEREREKEKSKERHKKDESDSDNQDMTDSHGYREEKKKEKDKDKERKHRRRHQSSIEDVDSEKDEKEESRKSRRHGSDRKKSRKHANSPESDNESRHKRHKRDHGDGSRRTGWNDELEDGELGDDGEV* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5678 1002 Gene3D FF domain 778 851 IPR036517 -
Mal1g5678 1002 Pfam FF domain 652 707 IPR002713 -
Mal1g5678 1002 Pfam FF domain 443 492 IPR002713 -
Mal1g5678 1002 Pfam FF domain 579 627 IPR002713 -
Mal1g5678 1002 Pfam FF domain 510 560 IPR002713 -
Mal1g5678 1002 ProSiteProfiles FF domain profile. 648 711 IPR002713 -
Mal1g5678 1002 Gene3D FF domain 641 722 IPR036517 -
Mal1g5678 1002 Gene3D FF domain 571 640 IPR036517 -
Mal1g5678 1002 Gene3D FF domain 498 570 IPR036517 -
Mal1g5678 1002 Gene3D FF domain 441 496 IPR036517 -
Mal1g5678 1002 CDD WW 238 265 IPR001202 GO:0005515
Mal1g5678 1002 Pfam WW domain 195 222 IPR001202 GO:0005515
Mal1g5678 1002 Pfam WW domain 238 263 IPR001202 GO:0005515
Mal1g5678 1002 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 7 997 IPR039726 GO:0045292
Mal1g5678 1002 MobiDBLite consensus disorder prediction 846 1002 - -
Mal1g5678 1002 MobiDBLite consensus disorder prediction 924 948 - -
Mal1g5678 1002 Gene3D - 190 233 - -
Mal1g5678 1002 Gene3D - 234 278 - -
Mal1g5678 1002 Coils Coil 765 789 - -
Mal1g5678 1002 ProSiteProfiles FF domain profile. 508 563 IPR002713 -
Mal1g5678 1002 Coils Coil 624 652 - -
Mal1g5678 1002 MobiDBLite consensus disorder prediction 151 200 - -
Mal1g5678 1002 SUPERFAMILY WW domain 196 230 IPR036020 GO:0005515
Mal1g5678 1002 SUPERFAMILY FF domain 568 637 IPR036517 -
Mal1g5678 1002 Coils Coil 557 586 - -
Mal1g5678 1002 ProSitePatterns WW/rsp5/WWP domain signature. 197 222 IPR001202 GO:0005515
Mal1g5678 1002 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 7 997 - -
Mal1g5678 1002 Coils Coil 836 892 - -
Mal1g5678 1002 SMART ww_5 192 224 IPR001202 GO:0005515
Mal1g5678 1002 SMART ww_5 233 265 IPR001202 GO:0005515
Mal1g5678 1002 CDD WW 195 224 IPR001202 GO:0005515
Mal1g5678 1002 Coils Coil 489 512 - -
Mal1g5678 1002 SUPERFAMILY WW domain 237 270 IPR036020 GO:0005515
Mal1g5678 1002 SUPERFAMILY FF domain 502 570 IPR036517 -
Mal1g5678 1002 ProSiteProfiles WW/rsp5/WWP domain profile. 232 265 IPR001202 GO:0005515
Mal1g5678 1002 MobiDBLite consensus disorder prediction 151 199 - -
Mal1g5678 1002 MobiDBLite consensus disorder prediction 846 916 - -
Mal1g5678 1002 ProSiteProfiles WW/rsp5/WWP domain profile. 191 224 IPR001202 GO:0005515
Mal1g5678 1002 SUPERFAMILY FF domain 643 718 IPR036517 -
Mal1g5678 1002 ProSiteProfiles FF domain profile. 576 630 IPR002713 -
Mal1g5678 1002 MobiDBLite consensus disorder prediction 957 991 - -
Mal1g5678 1002 SUPERFAMILY FF domain 435 495 IPR036517 -
Mal1g5678 1002 SMART FF_2 508 563 IPR002713 -
Mal1g5678 1002 SMART FF_2 441 495 IPR002713 -
Mal1g5678 1002 SMART FF_2 783 838 IPR002713 -
Mal1g5678 1002 SMART FF_2 576 630 IPR002713 -
Mal1g5678 1002 SMART FF_2 650 711 IPR002713 -
Mal1g5678 1002 SUPERFAMILY FF domain 784 845 IPR036517 -
Mal1g5678 1002 ProSiteProfiles FF domain profile. 441 495 IPR002713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5678 Mal-Chr1 133243496 133263787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5678 K12821 - gmx:100806019 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5678 1 133243496 133263787 Mal1g5678 1 133243496 133263787 ECH