Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5674 ATGGATCTTGGTGTAGTGAGTTTAGAAGGTTTGGTTAGTTCAGATCCTGAGTCAAAGAACAAATGGTACAATAATAATGGATCTGGTTTACTTAAACAAGAGAGATCTGGAACATGTACTGAAGATGAGTTAAGAAGTTTCAAACTTGCAAAAACTGATCAACAAAGAAACAACTCTTCTTGTTCAGCTTCACTTTTGAGATCTAATGCAACTACACTTTTTTCTTCTGATGGTCAACACCAACAACAAATGCTTAGTTTTTCAACTCCAACTTCAAAATCAGAATCTTTTTTAGTTGATAAAACTACTCAAAATGCTGCATTGTCTTATGCTGCTGCTTACCATCCAATGTCTAGTTACAACAGAAATACAGGTTATAGTTCTGTAAGCATGCATGGAGGTTTAAGTGGTGTTAGAGGACCATTCACACCTTCTCAGTGGATGGAGTTGGAACATCAGGCTTTGATCTATAAGTACATCACTGCAAATGTTGCTGTACCTCATCATTTGCTTATACCTATTAAAAAAGCCCTTGATTCTGCTGGCTTATCTAGCTTCTCAACTGCTCTCCTCAGACCAAATGCATTGGGATGGGGAGGATTCCATCTGGGATACTCGAACAACACCGATCCGGAACCAGGAAGGTGTAGGAGAACAGATGGAAAGAAATGGCGATGCTCAAGAGATGCCGTTGTTGATCAAAAGTACTGCGAAAGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCTGGCCAGGCTCTCACCACTGGTGGAACCACAAATACAGCTACTACTACTACTACTACTTCTACCATTACTCCAAGTGGTTCATCAAAGCAGATCAATGCTGCTGCTGTTTCTCCTTCTTCATCAATTGTTGTTCCTGGTAGAAACACTGCATCCAACACTCTTAGCTTTGCACACCAGGAACATTCCAAGAATATGAACAGCCTTATTGGACAAGATAATGCTTCTTCTGCTGCCAACACCATCAACAGGATGTTCATGAATAACAAAGAGAATAATAACAACACTAGTGAGAGGATGCAGGATGGTCCTGCACTTCCAATGCTGCCACCCACTCTTGAGTTGAAACCGAAGGAAAATCACCCTTTTATGATTCAAAAACAGCACATTTCATATGACGAATCCTCAAGGAACAACGAATTTGGCTTTGTCACGTCTGATTCCCTTCTTAACCCTTCACAGAAACCCTCCACCTTGCTGGGAACCCGAACCTTTGGTTCCGCTACGCAGAACCCTACAAACCGAGACACAGGCTCTCAACATTCCCTCAGGCATTTCATTGATGACTTTCCCAAACCACACTCCGACCATCATCATAATCGCTCAGGTGGTTTTTCTTGGCCGGAGCTTGACATGCAGTCTGATAGGACACAACTATCAATTTCAACACCAATGACTTCCTCTGACTTCATGTCGTTTACTTCCTCGGCAACCAATGAAAAACTCACACTTTCGCCTCTTAGGCTATCAAGGGAATTAGACCCTATTCAGATGGGGTTAGGAGTTGGAAGTAGTACTCTCAATAACAACAATGAATCATCAAACACTAGTACTACTACAAAGCAAGCTAATTGGATTCCAATAACTTGGGAGAGTTCAATGGGTGGTCCACTTGGAGAGGTTCTTCATCTTAGTAATACTACTATTGCCTACAATGCAAATGAGGATCACTATGGCGGTAGCGGCAACAACAATTCGTCGGCTCTAAATCTCATGACTGATGGTTGGGACAATCACAATAGTCCTCCAATGGGATCATCGCCAACCGGAGTCCTTCAAAAGACAGCATTTGGATCGCTTTCAAATAGTAGCGCCGGTAGTAGTCCAAGGGCAGAGAACAATAAAACAACTCAAGAAGGTGCTAGTTTGTGCAATGATCTTCTAGGATCAAATCTTGGTAATAATGCTTCCTTTACTCCTTAG 1968 0.4212 MDLGVVSLEGLVSSDPESKNKWYNNNGSGLLKQERSGTCTEDELRSFKLAKTDQQRNNSSCSASLLRSNATTLFSSDGQHQQQMLSFSTPTSKSESFLVDKTTQNAALSYAAAYHPMSSYNRNTGYSSVSMHGGLSGVRGPFTPSQWMELEHQALIYKYITANVAVPHHLLIPIKKALDSAGLSSFSTALLRPNALGWGGFHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGQALTTGGTTNTATTTTTTSTITPSGSSKQINAAAVSPSSSIVVPGRNTASNTLSFAHQEHSKNMNSLIGQDNASSAANTINRMFMNNKENNNNTSERMQDGPALPMLPPTLELKPKENHPFMIQKQHISYDESSRNNEFGFVTSDSLLNPSQKPSTLLGTRTFGSATQNPTNRDTGSQHSLRHFIDDFPKPHSDHHHNRSGGFSWPELDMQSDRTQLSISTPMTSSDFMSFTSSATNEKLTLSPLRLSRELDPIQMGLGVGSSTLNNNNESSNTSTTTKQANWIPITWESSMGGPLGEVLHLSNTTIAYNANEDHYGGSGNNNSSALNLMTDGWDNHNSPPMGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKTTQEGASLCNDLLGSNLGNNASFTP* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5674 655 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal1g5674 655 ProSiteProfiles WRC domain profile. 210 254 IPR014977 -
Mal1g5674 655 MobiDBLite consensus disorder prediction 254 288 - -
Mal1g5674 655 Pfam WRC 211 253 IPR014977 -
Mal1g5674 655 MobiDBLite consensus disorder prediction 577 636 - -
Mal1g5674 655 Pfam QLQ 141 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal1g5674 655 MobiDBLite consensus disorder prediction 242 288 - -
Mal1g5674 655 PANTHER GROWTH-REGULATING FACTOR 9 19 633 - -
Mal1g5674 655 PANTHER - 19 633 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mal1g5674 655 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5674 Mal-Chr1 133163200 133167118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5674 1 613 GRF Transcription Factor Family AT2G22840 38.932 4.09e-98 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal1g5674 WRC 6.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5674 - - cam:101496763 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5674 1 133163200 133167118 Mal1g5674 1 133163200 133167118 ECH