Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5671 ATGAAGTCCATGATGAATGATAGTAACATTAGTGATGATGGAAACAATCATAACTGGTTAGGATTCTCTCTCTCACCCTACCATATGAAAATGGAGTTTACTTCTTCTGACCCTTCTCAACATCCTAGTCACCACCAAAATCATCATCACTACTATCAAAATCATTATGATAACCAAACTTCCTCTCATGTTGTTCCCTCAAACTTCTACTTGATGTCACCTTCACATCTAAACATAAACAACACTTCTTCATTATGTTATGGTCTTGGAGAAAACAATAACTCCTTTCATTCTTCTTTACCTATGATGCCACTTAAATCTGATGGATCACTTTGCATAATGGAAGAAGCTCTCACTAGATCACAATCACAAGTGATGATGCCAACTTCATCTCCAAAACTAGAAGATTTCCTTGGTGGTGCAACTATGGGAACTCATAATCATGAATATGAAGGACATGAAAGAGAAACAATGGCTTTATTGAGCTTAGACAGCATCTACTATGACAACAATGCAGAACATGAAACCAATAGAGAACATTCTTCTCTTGACCATTCTTCATATTTTTCAGAATTTTCTTGTCATGGAATGTATCAAACACCTATGTTGGAAGGAGATGAAACTAAGGAAGAAAACATTTATAGCTTCAAAAACTTTGTGGCTCCTAGAGATTATTCTTTGGAGCAACATCATCATCATCATCATCAAGTGAATACTACTAGTGTTGGAGATGATGGTTCTGTTGGAACAGTTAATGGTTGTGGAGAGTTACAATCTCTAAGCCTTTCTATGAGTCCTGGTTCTCAATCAAGTTGTGTTACTGTTCCAAGTCAGATTTCAGCTTCTGGAACTGATTCAGTAGTTGTTGAAGCTAAAAAGAGAGGGCATGCTAAGGTTGGACAGAAGCAACCTGTTCATAGGAAAACTATTAGCACATTTGGTCAAAGAACTTCTCAATACAGAGGAGTAACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGTTTATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCTTGCTGCTCTCAAATATTGGGGACCTTCAACACATATAAACTTCTCGCTTGAAATTTACCAAAATGAACTTGAAGAAATGAATAACATGAATAGGCAGGAATATGTTGCTCATTTGAGAAGAAAGAGTAGTGGTTTTTCAAGGGGTGCTTCAATGTATAGAGGGGTGACAAGGCACCACCAGCATGGTAGATGGCAAGCAAGGATAGGCAGAGTAGCAGGAAATAGGGACCTTTATCTTGGAACATTTAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCGGCGATCAAATTCCGTGGTCTAAATGCAGTCACAAACTTTGATATGTCTAAATACAATGTCGAAAAAATCATGTCGAGCAACACCTTGGTTGCTGGTGAGCAAGCTAGAAGATCAAAGAAAAGTAAAGAATGTGATGAACCAAAAACTGAAGCTAAAGAGTGTAACAACAATGTTGTATCAAGTCCAATCATACATAGTCAAGAAGTTGAAGCTGTTAACAACAATGAAAATAATTGGAACCAGTCCCCACATCAACAAGAGTCAAATACATGTGACCAAGAAACTGTCAAGCATGAAAATTCAATTAGAAATTCTGCTTTTTCAATGTCCCTACAAGATATCATTGGGATTGATTCAGTAGGAGGATCTAGCCAAGTTATGTTAGAGGATGATTCCTCCAACAAGATGATAAGGACTCATTTTTCAAATTCATCTTCACTTGTGACTAGTTTAAGTAGCTCAAGAGAATGCAGCCCTGACAACAAAAGTACTGGTCCCACAATGCTTTTTCCAAAACCTCCAACAGGGTCAAAAATGGTTAGTCCTATTGCTACAAGTGTTGGATCATGGTTTCCTTCAGCTAGTGCTATTTCAATGTCTCATTTGCCAGTTTTTGCAGCTTGGAGTGATACTTAG 2031 0.3791 MKSMMNDSNISDDGNNHNWLGFSLSPYHMKMEFTSSDPSQHPSHHQNHHHYYQNHYDNQTSSHVVPSNFYLMSPSHLNINNTSSLCYGLGENNNSFHSSLPMMPLKSDGSLCIMEEALTRSQSQVMMPTSSPKLEDFLGGATMGTHNHEYEGHERETMALLSLDSIYYDNNAEHETNREHSSLDHSSYFSEFSCHGMYQTPMLEGDETKEENIYSFKNFVAPRDYSLEQHHHHHHQVNTTSVGDDGSVGTVNGCGELQSLSLSMSPGSQSSCVTVPSQISASGTDSVVVEAKKRGHAKVGQKQPVHRKTISTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSLEIYQNELEEMNNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNRDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDMSKYNVEKIMSSNTLVAGEQARRSKKSKECDEPKTEAKECNNNVVSSPIIHSQEVEAVNNNENNWNQSPHQQESNTCDQETVKHENSIRNSAFSMSLQDIIGIDSVGGSSQVMLEDDSSNKMIRTHFSNSSSLVTSLSSSRECSPDNKSTGPTMLFPKPPTGSKMVSPIATSVGSWFPSASAISMSHLPVFAAWSDT* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5671 676 MobiDBLite consensus disorder prediction 543 562 - -
Mal1g5671 676 PRINTS Ethylene responsive element binding protein signature 320 331 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 PRINTS Ethylene responsive element binding protein signature 461 481 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 SUPERFAMILY DNA-binding domain 318 387 IPR016177 GO:0003677
Mal1g5671 676 MobiDBLite consensus disorder prediction 616 635 - -
Mal1g5671 676 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 673 - -
Mal1g5671 676 CDD AP2 420 481 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 ProSiteProfiles AP2/ERF domain profile. 319 385 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 CDD AP2 318 384 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 ProSiteProfiles AP2/ERF domain profile. 421 479 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 MobiDBLite consensus disorder prediction 616 641 - -
Mal1g5671 676 SUPERFAMILY DNA-binding domain 420 481 IPR016177 GO:0003677
Mal1g5671 676 Pfam AP2 domain 422 471 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 Pfam AP2 domain 319 377 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 673 - -
Mal1g5671 676 Gene3D AP2/ERF domain 318 387 IPR036955 GO:0003700|GO:0006355
Mal1g5671 676 Gene3D AP2/ERF domain 421 481 IPR036955 GO:0003700|GO:0006355
Mal1g5671 676 SMART rav1_2 319 391 IPR001471 GO:0003700|GO:0006355
Mal1g5671 676 SMART rav1_2 421 485 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5671 Mal-Chr1 133064466 133068443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5671 12 506 AP2-EREBP Transcription Factor Family AT4G37750 52.523 1.78e-152 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mal1g5671 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5671 K09285 - gmx:100798179 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5671 1 133064466 133068443 Mal1g5671 1 133064466 133068443 ECH
Mal1g5671 1 133064466 133068443 Mal2g1093 2 12751428 12754629 PCT