Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5668 ATGGGTGGTGAGGAAAATGCTATGGAGTTTCAACTTGGAAATGAGAACATTATGACTTCAGAAATGGATGTTAGTTCTGTGTCCAATATGGCTAATAAGCCTTCTTCAGAGGTAGTCAATCATCACCATCCTTTCCTTGGTTCTTCAGCTTGGGATAATCAGCTTGTTTCAATGAGTCAAGCTCATACTTTTGGAGGTTCTTCAATGGTTTCTCACAATGAGTTTGCTAATACAAATTCAGCTTATAACCCTCTTGTTTTGGAGAATCAAGGAATGAGTAGCACTTCTCACCTTGTTCAATACTCAAATCTTGGTGGCATGATCCATAAGATTCCTTCCTATGGAAGTGGAAGTTTCTCTGAAATGGTTGGTCCCTTTGGCCAACATGGTGATCATGTAGCTAACACATCAGGGTATTCAATTCCACCACAACATTATAATCAAATCAAGGATGCTGGAATCCAAAGGGGTCAAATTAATGGTGAACAATCTCAGGTTGAGGATTCAATTCATGAGGATGGAGCTACAGGATCTGCACCTGGTAGTGGAAGTAGAAGAAAAAGAGGACTTGATCAAAATTCTACTTTCAGTCCAAACAAGAATGCTGAGGGTGATAGAGTGAAAGATTCTCCAAGGAAGATCTCTGATGGTTCAAAAGAACATGAAAAGAAACCAAAAGTTGAACAATCAGGGAAGCAAGCTAAAGACAACTCTCCCAGTGGAGATGCTTCTAAAGACAATTTCATTCATGTGAGAGCTAGAAGAGGTCAAGCCACAAACAGTCACAGCCTTGCAGAAAGGGTTAGAAGAGAAAAGATTAGTGAACGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTAGATGAGATAATAAACTATGTGCAATCACTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACCGTGAACCCTGAACTGAATTTTGATGTAGAGCGGCTCTTATCCAAGGATATTCTCCAGTCACGCTTAGGACTCGGAATCGGTGGATTTGTTCCTGGTATAAGCTCCTCTCATCAATTCCCAAATGCAAGTTTCCAAGGTAACATGGCTGGCATGCCTAGTTCATCAACACAGTTCCCTCCTCTGCCTCAGAATGCTTTGGACCATGACTTCCAAAACTTTTATGGAATGGGATATGATCCCAATACATCACTTGACAATTTGGGACCAAATGGGAGGTTGAAACCAGAGTTATAG 1254 0.4099 MGGEENAMEFQLGNENIMTSEMDVSSVSNMANKPSSEVVNHHHPFLGSSAWDNQLVSMSQAHTFGGSSMVSHNEFANTNSAYNPLVLENQGMSSTSHLVQYSNLGGMIHKIPSYGSGSFSEMVGPFGQHGDHVANTSGYSIPPQHYNQIKDAGIQRGQINGEQSQVEDSIHEDGATGSAPGSGSRRKRGLDQNSTFSPNKNAEGDRVKDSPRKISDGSKEHEKKPKVEQSGKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERLLSKDILQSRLGLGIGGFVPGISSSHQFPNASFQGNMAGMPSSSTQFPPLPQNALDHDFQNFYGMGYDPNTSLDNLGPNGRLKPEL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5668 417 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 255 325 IPR036638 GO:0046983
Mal1g5668 417 MobiDBLite consensus disorder prediction 202 231 - -
Mal1g5668 417 CDD bHLH_AtBPE_like 247 332 - -
Mal1g5668 417 MobiDBLite consensus disorder prediction 160 245 - -
Mal1g5668 417 Pfam Helix-loop-helix DNA-binding domain 260 308 IPR011598 GO:0046983
Mal1g5668 417 Gene3D - 254 328 IPR036638 GO:0046983
Mal1g5668 417 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 18 417 - -
Mal1g5668 417 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 18 417 IPR024097 GO:0006355
Mal1g5668 417 SMART finulus 263 313 IPR011598 GO:0046983
Mal1g5668 417 MobiDBLite consensus disorder prediction 187 201 - -
Mal1g5668 417 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 307 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5668 Mal-Chr1 133020751 133023632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5668 44 417 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 43.928 6.15e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g5668 HLH 4.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5668 - - gmx:100794464 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5668 1 133020751 133023632 Mal1g5668 1 133020751 133023632 ECH