Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5659 ATGCACTATAAAATGCACACCCCTTTCCCTCAGATTCGGTTACATCAAAAACCGTTAATTTTTTCTCTGCCACCTTGGCAGAAGAATCTCCAACGCAAAACCCAAACCCAACACCTCTTTCTCCGTCATCACCACCACCGCCCTTTGTTTCTTCCGAGAAATTATGGTTCGTCGGAGAAGGTGAATCAGCGTGAGGATAGCGTGACGAGTACTGATGCTGGAGAAGTTAAATCGGAGAAACTTAACGGTGATGCTGATGTTATAATTGTTGGTGCTGGTATTGCTGGTGCTGCTTTGGCTCATACTCTTGGCAAGGATGGACGTCGAGTGCATGTCATTGAAAGAGATCTGAGTGAGCCTGACAGAATTGTTGGAGAGTTGCTACAACCCGGTGGCTATCTCAAATTAGTTGAACTGGGGCTTCAAGATTGTGTAGAAAACATTGATGCGCAGAGAGTGTTTGGTTATGCTCTTTTCAAGGACGGGAAACATACCCGTCTCTCTTATCCCTTGGAAAAGTTTCACTCAGATGTCTCTGGCAGAAGTTTTCACAATGGGCGTTTTATTCAGAGGATGCGAGAGAAGGCTGCCGCCCTTCCCAATGTAAATATGGAGCAAGGAACAGTCATTTCCCTACTTGAAGAGAAGGGTACAATTAAAGGTGTGCAATACAAGAATAAAGAAGGTCAGGCATTGACAGCATACGCTCCTCTTACCATTGTTTGTGATGGCTGTTTCTCAAACCTGCGTCGTTCTCTTTGCAACCCTAAGGTAGATAATCCCTCTTGTTTTGTTGGCTTAATTTTAGAAAACTGTGAACTTCCATGTGCCAATCACGGCCACGTCATACTTGGAGATCCTTCGCCAATTCTTTTCTATCCTATAAGCAGTACAGAGATTCGTTGTCTGGTTGATGTACCTGGTACGAAGGTTCCTTCTATTTCAAACGGTGATATGACAAAGTATCTAAAGATAACGGTTGCTCCGCAGGTCCCACCTGAGCTTTATGGTGCATTCATAGCCGCGGTGGAGAAAGGCAACATAAGGACAATGCCGAACAGAAGTATGCCAGCAGATCCTCGTCCTACTCCTGGAGCCGTACTGATGGGAGATGCATTCAACATGCGTCATCCACTAACAGGGGGTGGAATGACCGTAGCATTGTCTGACATTGTGGTGTTGAGAAATCTTCTCAAGCCTTTGCGTGACCTGAACGATGCACCTACACTTTGCAAATACCTCGACTCCTTTTATACCTTGCGTAAGCCTGTGGCGTCCACCATAAATACATTGGCAGGAGCCCTTTACAAGGTTTTCAGTGCATCCCCCGATCCTGCAAGGAAGGAAATGCGCCAAGCTTGTTTTGATTATCTGAGCCTTGGAGGCCTATTCTCAGAAGGACCGATCTCTTTACTTTCAGGATTAAACCCTCGGCCCTTAAGCTTGGTTCTCCATTTCTTTGCTGTCGCGGTATTTGGTGTTGGCCGTTTACTATTACCATTTCCTTCACCTAAGCGAGTGTGGATTGGAGCTCGATTACTCTCTGGTGCATCTGGAATCATTTTACCCATAATTAAGGCCGAAGGAATTAGGCAGATGTTTTTCCCTGCCACTGTACCAGCTTATTACAGAGCTCCCCCGGCTTCAAAAGAGTGA 1656 0.4577 MHYKMHTPFPQIRLHQKPLIFSLPPWQKNLQRKTQTQHLFLRHHHHRPLFLPRNYGSSEKVNQREDSVTSTDAGEVKSEKLNGDADVIIVGAGIAGAALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVENIDAQRVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAAALPNVNMEQGTVISLLEEKGTIKGVQYKNKEGQALTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILENCELPCANHGHVILGDPSPILFYPISSTEIRCLVDVPGTKVPSISNGDMTKYLKITVAPQVPPELYGAFIAAVEKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDAPTLCKYLDSFYTLRKPVASTINTLAGALYKVFSASPDPARKEMRQACFDYLSLGGLFSEGPISLLSGLNPRPLSLVLHFFAVAVFGVGRLLLPFPSPKRVWIGARLLSGASGIILPIIKAEGIRQMFFPATVPAYYRAPPASKE* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5659 551 Gene3D - 73 440 IPR036188 -
Mal1g5659 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 235 250 - -
Mal1g5659 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 378 394 - -
Mal1g5659 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 86 108 - -
Mal1g5659 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 363 378 - -
Mal1g5659 551 Pfam Squalene epoxidase 236 508 IPR013698 GO:0004506|GO:0016021|GO:0050660
Mal1g5659 551 PANTHER SQUALENE MONOOXYGENASE-RELATED 53 549 - -
Mal1g5659 551 PANTHER SQUALENE MONOOXYGENASE 53 549 IPR040125 GO:0004506|GO:0016126
Mal1g5659 551 Pfam NAD(P)-binding Rossmann-like domain 89 115 - -
Mal1g5659 551 MobiDBLite consensus disorder prediction 52 71 - -
Mal1g5659 551 SUPERFAMILY FAD/NAD(P)-binding domain 85 460 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5659 Mal-Chr1 132826917 132832423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5659 64 551 Miscellaneous Gene Families AT1G58440 77.597 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5659 K00511 - gmx:100804406 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5659 1 132826917 132832423 Mal1g5659 1 132826917 132832423 ECH
Mal1g5659 1 132826917 132832423 Mal2g1091 2 12720410 12725151 PCT