Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5646 ATGGCTTCTTCTTCTTCTCCGTCACAATCCTCTTCTTCTGCAACTCCTTCTCCTTCCTACATCACTCTCCTTCCCATTGCTCCTTCTTCTCCCAGTGAGAAGGTTGAAGAAGAGGAACCGCGAGTTCCGATTTATGTTGTGACGAAAGCGTCGCAACTACCTGTGGATTTCCTCGAACCTTCGCCTCTATCGAAGATCGTTATCGGTTTTGATTGTGAGGCTGTTGACTTGTGTCGCTATGGAACTCTTTGCATTATCCAGCTGGCATTTCCTGATGCTATATACCTGGTTGATGCAATTGAAGGGGGGAGTGTGCTTATCGAAGCCTGTAAGCCTGCACTTGAGTCTGATTATGTCACAAAAGTGATTCATGATTGCAAACGCGACAGTGAGGCATTGTACTTTCAGTTCGGCATCAAGTTAAACAACGTGGTGGATACCCAGATTGCTTACTCGCTTATAGAAGAACAAGAAGGACAAAAGCGATTTCCAGATGACTATATTTCACTTGTTGGTCTCCTTGCAGATCCACGTTATTGTGGCTTATCATATGTTGACAAGGAAGAAGTCCGTGTCCTCCTTCGACAGGACCCCAATTTTTGGACTTACAGACCTTTATCTGAACAAATGATCCAATCTGCCGCCGATGATGTCCGTTTCCTTCTCTACATTTATCATCAAATGATGGCAAAATTAACTGAACGGTCTTTGTGGCATCTTGCTGTTCGTGGTGCCTTGTACTGCCGGTGTTTCTGTGTGAACAGCAATGATTATGCTGATTGGCCGTCTCTACCTCCGATTCCAGATGAGCTGAAAGTTGATGGAAATGGTCCTGAGGAAGAAATTCTTTCAATTCTTGATGTTCCCCCAGGAAAGATGGGATGCATTATTGGGAAAAAAGGGGCTTCGATTATGTCAATTAAGGAGTCTTGCAATGCGGAAATTCTCATTGGAGGTCCCAGGGGTCCAGCTGACAAGGTTTTCATCATAGGACCGGTGAAGCAGGTGAAGAAAGCTGAGGCCATGTTAAGGGGTAGACTTTTGTACATCTGA 1053 0.4492 MASSSSPSQSSSSATPSPSYITLLPIAPSSPSEKVEEEEPRVPIYVVTKASQLPVDFLEPSPLSKIVIGFDCEAVDLCRYGTLCIIQLAFPDAIYLVDAIEGGSVLIEACKPALESDYVTKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGQKRFPDDYISLVGLLADPRYCGLSYVDKEEVRVLLRQDPNFWTYRPLSEQMIQSAADDVRFLLYIYHQMMAKLTERSLWHLAVRGALYCRCFCVNSNDYADWPSLPPIPDELKVDGNGPEEEILSILDVPPGKMGCIIGKKGASIMSIKESCNAEILIGGPRGPADKVFIIGPVKQVKKAEAMLRGRLLYI* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5646 350 SMART kh_6 280 348 IPR004087 GO:0003676
Mal1g5646 350 Pfam 3'-5' exonuclease 65 232 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mal1g5646 350 Gene3D K Homology domain, type 1 285 348 IPR036612 GO:0003723
Mal1g5646 350 SUPERFAMILY Ribonuclease H-like 35 260 IPR012337 -
Mal1g5646 350 ProSiteProfiles Type-1 KH domain profile. 281 343 - -
Mal1g5646 350 PANTHER - 22 347 - -
Mal1g5646 350 CDD KH-I 286 343 - -
Mal1g5646 350 Gene3D - 2 249 IPR036397 GO:0003676
Mal1g5646 350 SMART 35exoneu6 44 233 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mal1g5646 350 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g5646 350 Pfam KH domain 286 344 IPR004088 GO:0003723
Mal1g5646 350 CDD Egl_like_exo 56 252 - -
Mal1g5646 350 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 278 346 IPR036612 GO:0003723
Mal1g5646 350 PANTHER EGALITARIAN, ISOFORM B 22 347 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5646 K18740 - gmx:100788577 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5646 1 132573435 132585557 Mal1g5646 1 132573435 132585557 ECH