Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3078 ATGGCTACCAATCTGAACGACCCAAATTCTTCTTCTTCTTCTGTAGTTTCTTTCAGTGATTTCCCAGAAGATGTTCAGCTCTGCATCCTCTCATTTCTGGGTCCCTCTGAGATCGCCACCTTCGCCTGCACCTCCAAGCGTTTCCTCTCGCTCTGCACCAACGACGCCAAGCTCTGGTTCACCCTCTGTCACCGAAGATGGGGCTCCGAAACCCAAATCACCAAATGGGGTCAAGGAAAAATCGCCTTCAAGCTTCTCTACAATACCCTCCATGAATGGGACAACCTCATCGGCTTCTGGCGCCGCTGCGGCTCCGGCACCGGGACGCCATCGTTGCTGTTCTTCGAGTGGGGCCCGTCGTTCCTCTCGGGTTCCCGGGTCTCCGCTTTACAACCCGGATCCTACGAGGTTGCAAAGGTGCCGTTTATACGGATGAGTCTATCGGAGGAAGGGCAGGAAGTGAATCTGTTGGACCCTGATGGGCAAGCTGATTTTGATTCTGAGAATGAGTTGATTCCTGTGAATTTGAGCTTCATGGGGAAGACGCATTTCGTTGTGGAGGAGAATCAGTTCAGGAGGAGCTCCAGCTATGCGAATCTCAGTGGTGGTGGTGGTGATGATTGTGGCGGGGCTGGAGAGGATTTGATTGGTTCTTCGCCGCCAGGGAGCTTGCCGGATCGGTTGGTGACGGAGATTTACCAGCGGTTCGCGAACAGGACTAGTCCAGGCAGTGAGAGGTCGAGGAGGCAGAGGAGGAAGGAGAAGGAGAGATTGGCTAGGATGAGGAAATGGGAGCCTGAGCATTTTGTCAAGATTGTGAATTGCTCGCCCTCGCCGTCACGGCCTTTGCAAGGCCTTTGGAAGGGTATTTGTGATGATATGAGTTTAGCCTTTTACCTTGTGGCATATGATGACATTGGGGGCATTGCCTGTCGCCGCCTCGGGGACCCTCCAGAACGTTTCTCCACTTACGCCCCGGTTTTCTGGACGTCTAACGCTGCATTTCTAGAATCCCCTTTTCCTCTTGAGGAAGAATCTTTGTATGACAGTCGCATTCATCTTCAACCACACAATGATACTCACGAGCAGTTTGATTTCTCTTCCGATGAAGGGGTAAATCAAGTTCAACATTTCCAGTTGCCAGACATTGAAGTGGTGAATGGAATTCTTCACATCAGCTCAAGTTATGATTTAGTTATTGCAGACCTTGCTGGAACAATAAATTCAAGAAGTGCAGAGGGAAGGATTTGGCTGTACCATGACGGTACTTTCGGTTTCGGATTCCTTCGGGACAATTTTGTCATAGACATGAAACATATTGTCCATGATGGTTGTATTGTGAATGCAGTAAATCCTTCTGCTGATTAA 1368 0.4993 MATNLNDPNSSSSSVVSFSDFPEDVQLCILSFLGPSEIATFACTSKRFLSLCTNDAKLWFTLCHRRWGSETQITKWGQGKIAFKLLYNTLHEWDNLIGFWRRCGSGTGTPSLLFFEWGPSFLSGSRVSALQPGSYEVAKVPFIRMSLSEEGQEVNLLDPDGQADFDSENELIPVNLSFMGKTHFVVEENQFRRSSSYANLSGGGGDDCGGAGEDLIGSSPPGSLPDRLVTEIYQRFANRTSPGSERSRRQRRKEKERLARMRKWEPEHFVKIVNCSPSPSRPLQGLWKGICDDMSLAFYLVAYDDIGGIACRRLGDPPERFSTYAPVFWTSNAAFLESPFPLEEESLYDSRIHLQPHNDTHEQFDFSSDEGVNQVQHFQLPDIEVVNGILHISSSYDLVIADLAGTINSRSAEGRIWLYHDGTFGFGFLRDNFVIDMKHIVHDGCIVNAVNPSAD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3078 455 Pfam F-box domain 18 55 IPR001810 GO:0005515
Lja5g3078 455 ProSiteProfiles F-box domain profile. 15 62 IPR001810 GO:0005515
Lja5g3078 455 SUPERFAMILY F-box domain 7 87 IPR036047 GO:0005515
Lja5g3078 455 Gene3D - 4 96 - -
Lja5g3078 455 SMART fbox_2 21 62 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3078 - - cam:101511334 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3078 5 60454787 60457046 Lja5g3078 5 60454787 60457046 ECH