Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3063 ATGTTGTTCCAGGACGAGGAAGCGGTCCAGTTCTCATGTCCTATGGTTCACGAAGCCATGTTCACGTCAAGTGAAATAGAGGAGCTGTTTTCACTCATCAACCAGCCCGATGATCCGTCCAGCCCAGGATCTGGTTCACAGGGGTCGAACCGGGCGGTTTACTCCGCGCAAGAGAGAAAGATAAGGAGAATGCAGTCAAACCGGGAGTCGGCCAGGCGGTCCCGTTGGAGAAAGAAGAGGCATTTGGAGAATCTCACAAACCAATTGAACCGATTGAGAATTGAAAACCGGGAACTGAAAAACCGGCTCACCTCGACGGTGCACCACCATCTCCTACTATCCGTGGAGAATGAATGTCTAATATCCGAATCCATGACCCTTATGGCCGAACTTTCGGATCCATGTCAAATTTCAAGCACCATGTTTTCACAATAG 435 0.4966 MLFQDEEAVQFSCPMVHEAMFTSSEIEELFSLINQPDDPSSPGSGSQGSNRAVYSAQERKIRRMQSNRESARRSRWRKKRHLENLTNQLNRLRIENRELKNRLTSTVHHHLLLSVENECLISESMTLMAELSDPCQISSTMFSQ* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3063 144 Pfam bZIP transcription factor 58 104 IPR004827 GO:0003700|GO:0006355
Lja5g3063 144 Coils Coil 54 102 - -
Lja5g3063 144 MobiDBLite consensus disorder prediction 33 79 - -
Lja5g3063 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Lja5g3063 144 CDD bZIP_plant_GBF1 60 110 IPR045314 GO:0003700|GO:0006355
Lja5g3063 144 PANTHER BZIP TRANSCRIPTION FACTOR 18 143 - -
Lja5g3063 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 18 143 - -
Lja5g3063 144 SUPERFAMILY Leucine zipper domain 59 112 IPR046347 GO:0003700|GO:0006355
Lja5g3063 144 MobiDBLite consensus disorder prediction 56 71 - -
Lja5g3063 144 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Lja5g3063 144 MobiDBLite consensus disorder prediction 33 54 - -
Lja5g3063 144 Gene3D - 57 110 - -
Lja5g3063 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 103 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3063 Lja-Chr5 60057586 60058171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3063 2 144 bZIP Transcription Factor Family AT3G49760 36.000 2.83e-19 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja5g3063 bZIP_1 1.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3063 - - gmx:102661984 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3063 5 60057586 60058171 Lja1g4080 1 51842109 51842537 PCT