Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3044 ATGGACATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATTGCTGTGTGTGTAGTGCTCTTTTCATTTTACTCAGTGTTAAGGAAACAGCCGGGTAATGTTAGTGTGTACTTTGGACGGAGACTAGCTTCTAAGCATTCAAGACGCCTTGAATTCTGCCTAGAAAGATTTGTTCCATCCCCTAGCTGGATATTAAAAGCATGGGATACATCTGAGGATGAGATATTGGCTATCGGTGGCTTGGATGCTGTGGTTTTTGTAAGGATACTTGTGTTTAGCATTCGAGTATTTTCCATTGCCGCTGTCATCTGCATTTCCATAGTGCTTCCTGTAAATTACAATGGTAAGACCAGAATGCATAAGGATATACCTTGGGAATCACTCGAAGTATTTACCATCGAGAATGTCAATGGTGCAAAATGGCTTTGGGCTCATTGTCTCGCATTATACATCATAACACTTGCGGCTTGTACTCTTCTTTACTTTGAATATAAAAGCATTACAAATTTGAGGCTGCTACATATTATTGGATCACCTCCAAATCCAAGTCATTTTAGTATTCTCGTGCGATCAATTCCCTGGTCTTCAGAAGAATCATATTGTGAGACTGTGAAAAAATTCTTCTCATATTATCATGCATCAACATATTTGTCACACCAAATGATTTATAAGTCTGGTACAGTACAGAAACTGAAGGATGATGCTGGACATATGTGCAAGGTACTTAGAGATTCTTCACTGGAAAAGAGTTGTAGGCCAAGTTTTATGCAGTGTTGGTGTTCTGGAGCACCCAAAAATTCTTTTAAGATGATTCCTGATGAGATAGATAGTATACCGGGCTACACTGACATGCATCTAGATACAAGAAAAAAGGAATGCGCAGCTGCTTTTGTGTTCTTTAAAAGTCGGTACGCAGCTCATATGGCTGCACATTCACTGCAAACATCAAATCCTATGTTATGGGCAACAGACATAGCTCCTGAACCACATGATGTTTACTGGTCCAATATTAGCATACCATACAGGCAACTTTGGATCCGTAATATAGCTACACTCGTGGCTTCAATTGCCTTCATGCTCGTGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAACTAGACGAGCTTCAGAAAATGTTCCCTTTTCTAATAGGGATTCTTAAAAAGAAATTCATACGTCAGCTGGTGACTGGTTATCTACCAAGTGTGATATTGGTTTTATTTATGTGTGCAGTTCCACCAATGATGATGCTATTTTCAGCCGTGGAGGGTTCTATTTCACGTAGTGAGAGGAAGAAGAGTGCATGTTGCAAAGTCTTGTACTTTACTATCTGGAATGTGTTTTTTGTTAATGTTTTTACTGGTTCCGTTATCAGTCAACTCTCTGTCTTTTCGAGTGTAACAGACCTGCCTGCCCAACTTGCCAAGGCAGTGCCATCCCAGGCTACTTTCTTCACAACTTACGTTTTATCATCTGGTTGGGCAAGTTTGGGAGTTGAAGTTATGCAAATTTTTCCTCTTATATGCAATCTATTGCAGAGATACGTACTCAGGCAGAAAGACGATGCAAGTGGTGGCAGCCTATCTTTTCCGTACCATACAGAAGTTCCAAGGGTCTTATTGTTTGGATTCCTTGGATTCACCTGTGCTATTCTGGCACCTCTAATATTGCCCTTCTTATTGATCTACTTCTTCATTGCTTACCTTATATACCGAAATCAGATTCTCAACGTGTACATCACAAAATACGATAGTGGAGGACAGTTCTGGCCCATTGCACACAACACAACCGTGTTTTCGTTGCTAGTTGCACAACTTATTGCGCTAGGAGTGTTTGGACTAAAACGCTCATCAGTTGCATCTGGATTCACCATTCCCCTGCTGATTGGAACCCTTCTTTTTCACCAGTATTGTAGGCAACGATTTCTCCCTGTATTTAGGAGTAATTCAGCACAGATCCTTATTGACATGGATAGGAGAGATGAGCAGTGTGGAAAAATGGAAGAGATTTATGAACAATTGCGTTCAGCCTACAGCCAGCTCAGTTTAGTGCCGGATGCCTCAAGCCAGTCTGGATCTTCCAGTCAGCACGAGGAGAAGGGGAGTGCTGAGTCTTCGGGAGATATGGAGAAAGGCAAGGAAATTGGTCCAAAAGATAGATCATCATGGCCTGTTCATCTAAAGAGTCCGGAAAAAGCGGTATCTGATGAAAAGCAGTCGAGTACTTCGCCTCTTGCATTGAGGAAGAATAATTCTGATGTGATTGTGCCCGAGGCAGTGCGCGAACATTTAGTCATTGACAGATTATGA 2316 0.4128 MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGRRLASKHSRRLEFCLERFVPSPSWILKAWDTSEDEILAIGGLDAVVFVRILVFSIRVFSIAAVICISIVLPVNYNGKTRMHKDIPWESLEVFTIENVNGAKWLWAHCLALYIITLAACTLLYFEYKSITNLRLLHIIGSPPNPSHFSILVRSIPWSSEESYCETVKKFFSYYHASTYLSHQMIYKSGTVQKLKDDAGHMCKVLRDSSLEKSCRPSFMQCWCSGAPKNSFKMIPDEIDSIPGYTDMHLDTRKKECAAAFVFFKSRYAAHMAAHSLQTSNPMLWATDIAPEPHDVYWSNISIPYRQLWIRNIATLVASIAFMLVFLIPVTFVQGLTQLDELQKMFPFLIGILKKKFIRQLVTGYLPSVILVLFMCAVPPMMMLFSAVEGSISRSERKKSACCKVLYFTIWNVFFVNVFTGSVISQLSVFSSVTDLPAQLAKAVPSQATFFTTYVLSSGWASLGVEVMQIFPLICNLLQRYVLRQKDDASGGSLSFPYHTEVPRVLLFGFLGFTCAILAPLILPFLLIYFFIAYLIYRNQILNVYITKYDSGGQFWPIAHNTTVFSLLVAQLIALGVFGLKRSSVASGFTIPLLIGTLLFHQYCRQRFLPVFRSNSAQILIDMDRRDEQCGKMEEIYEQLRSAYSQLSLVPDASSQSGSSSQHEEKGSAESSGDMEKGKEIGPKDRSSWPVHLKSPEKAVSDEKQSSTSPLALRKNNSDVIVPEAVREHLVIDRL* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3044 771 Pfam Late exocytosis, associated with Golgi transport 6 163 IPR032880 -
Lja5g3044 771 Pfam Cytosolic domain of 10TM putative phosphate transporter 184 336 IPR027815 -
Lja5g3044 771 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 718 - -
Lja5g3044 771 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 718 IPR045122 GO:0005227
Lja5g3044 771 MobiDBLite consensus disorder prediction 687 702 - -
Lja5g3044 771 Pfam Calcium-dependent channel, 7TM region, putative phosphate 347 614 IPR003864 GO:0016020
Lja5g3044 771 MobiDBLite consensus disorder prediction 687 755 - -
Lja5g3044 771 MobiDBLite consensus disorder prediction 703 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3044 Lja-Chr5 59588276 59597837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3044 K21989 - gmx:100796574 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3044 5 59588276 59597837 Lja5g3044 5 59588276 59597837 ECH
Lja5g3044 5 59588276 59597837 Lja1g4070 1 51662461 51670705 PCT