Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3036 ATGAAGAGGTTCTCTGTCTGCTGCTTCAGAAGTAGTGTCTTCAAGTCTCACTCCCACAGGAAGCACAAGAAATCTCAGTCTCAGATCATGGCAGGAAACATCTCTGGTCCAACTGTTTGTCAGGGTCCTAATATTTTGCACAATCATGATTTCTCTGGTGGGCTTAACTCTTGGCATCTCAATTGCTGCAATGGCTATGTAATTTCAGCTGACACAGGTAATCATGGAGGAATTTCAATGGAGTCGGGTGGTAATTATGCAGTTATCACTGACCGAAAGGAATGTTGGCAAGGTCTTGAGCAAGATATCACAGACAGAATATCCATTGGTTCCACTTACACGGTTTCAGCTTGTGTTGGAGTATCTGGGCTTTCTCAGGGATCTGCTGATGTTCTAGCTACTCTGAAACTAGAATATCATGGTTCAGCTGCTCGTTACATGTTCATTGGAAGAACTTCTGCTATGAAGGGTAGCTGGGAAAAGTTGGAAGGGAAATTCTCATTATCAACTATGCCTGATCGGGCTATATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACATCCTTATACGATCAGTAGAGATCAACTGTTCCAGTCCAAATAATAATACCACAAGCACAAAATGTGTTACCACAGGAGATGACAACATCATAATAAACCCCCAGTTTGAGGATGGCTTGAATAGTTGGTCTGGAAGAGGCTGCAAGATTATGTTGCATGATTCAATGGGAGATGGGAAAATTGTTCCGAAGTCTGGGAAGTTCTTTGCATCAGCAACAGAACGCACACAAACCTGGAACGGGATTCAGCAGGATGTAACTGCACATGTGCAGCGCAAGCTGGCCTATGAGGTCACTGCTTTAGTTCGAATATTTGGTAATAATGTTACTAATGCTGATGTAAGAGCTACTTTGTGGGTTCAAACACCAGATCTTCGAGAGCAGTATATAGGCATTGCAAATGTGCAGGCAACAGATAAAGATTGGGTTACAATGCAGGGAAAATTCCTTCTAAATGGCACCCCATCAAAAGTGGTGGTTTATTTAGAGGGCCCCCCTTCTGGCACTGACATTCTTGTCAATACTTTGGTAGTTAAGCATGCAGCAAAAACACCTCCTTCAACTCCACCAGATGTAAAGAATCTTGCTTTTGGGGTTAATGTCATTGAGAACAGCAATCTGGCTGATGGCACCAACGGATGGTTTCCGCTTGGTAATTGCACTTTAAGTGTTAAAACAGGTTCACCTCATATAATGCCACCAATGGCAAGAGATTCTCTTGGTCCTCATGATCTCCTAAGCGGGCGCTACATCCTCGTAACTGGTCGGACTCAAACATGGATGGGTCCTGCTCAGATAATCACTGAGAAATTGAAACTTTTTGTGACTTACCAAGTATCTGCATGGGTCAGGATTGGTTCAGGATCAAGTGGGCCACAGAATGTGAATGTTGCTCTTGGTGTTGACAACCAATGGGTCAATGGAGGACAAACGGAGGTTTCTGATGACAGATGGCATGAAATTGGCGGGTCCTTTAGAATTGAACAGCAGCCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCTTCTGGTGTGGATTTAATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAGATACTTAAGGATGCAGACAGACAAGATTCGTAAGCGTGATGTTATTCTGAAATTCTCTGGGGTTGACTCTAGCAACTACATTAACACCATGGTGCAAGTTAGGCAAACACAGAACAATTTCCCAATTGGAACATGCATCAGTAGAATGAACATTGACAATGAAGATTTCGTTAACTTCTTTGTGAAACATTTCAACTGGGCCGTGTTTGGAAACGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATTTCAACTACAAGGATGCTGATGATCTGCTAGACTTGTGCCAAAAGAACAAGATAGAAACTCGCGGACACTGCATCTTCTGGGAAGTGGATGGAACAGTTCAGCAATGGATCAAATCACTGAATCAAAATGATCTGATGACAGCAGTCCAGAATCGTTTAAATGGTTTGCTGACTCGCTACAAGGGCAAGTTCAGTCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGATAGGCTAGGTAGGGATATCAGGGCAAAAATGTTCAAGACAGCAAACCAACTAGATCCATCTGCTACACTGTTTGTGAATGATTACCATGTTGAAGATGGATGTGACAACAAATCATGCCCAGAAAAATACATGGAACATATTCTTGATTTGCAAGAGCAAGGTGCCCCAGTTGGAGGGGTTGGAATTCAAGGCCACATTGATAGTCCAGTGGGGCCTATTGTTTGTTCTTCCCTTGATAAACTGGGAATTCTTGGTCTCCCTATATGGTTCACTGAGCTTGATGTGTCTTCTATCAATGAACATGTCAGAGCCGATGATCTTGAAGTTATGTTGCGCGAAGCGATGGCTCACCCTGCGGTAGAAGGCATCATGTTGTGGGGGTTTTGGGAGTTGTTTATGAGCAGGGACAATTCACACTTGGTAAATGCTGAAGGTGACATCAATGAAGCTGGGAAGAGGTTCCTTGATCTGAAACGAGAGTGGTTGTCTCACAAACATGATCATGTTGATGAGCATGGTCAATTCAGCTTCAGAGGCTTTCATGGAACATACAATGTTGAAGTTGTGACACCAACAAAGAAAATTTCTAAGACTTTTGTGCTTGACAAAGGTGACTCCCCAATGGTGGTATCCATTGATTTATAA 2793 0.4279 MKRFSVCCFRSSVFKSHSHRKHKKSQSQIMAGNISGPTVCQGPNILHNHDFSGGLNSWHLNCCNGYVISADTGNHGGISMESGGNYAVITDRKECWQGLEQDITDRISIGSTYTVSACVGVSGLSQGSADVLATLKLEYHGSAARYMFIGRTSAMKGSWEKLEGKFSLSTMPDRAIFYLEGPAPGVDILIRSVEINCSSPNNNTTSTKCVTTGDDNIIINPQFEDGLNSWSGRGCKIMLHDSMGDGKIVPKSGKFFASATERTQTWNGIQQDVTAHVQRKLAYEVTALVRIFGNNVTNADVRATLWVQTPDLREQYIGIANVQATDKDWVTMQGKFLLNGTPSKVVVYLEGPPSGTDILVNTLVVKHAAKTPPSTPPDVKNLAFGVNVIENSNLADGTNGWFPLGNCTLSVKTGSPHIMPPMARDSLGPHDLLSGRYILVTGRTQTWMGPAQIITEKLKLFVTYQVSAWVRIGSGSSGPQNVNVALGVDNQWVNGGQTEVSDDRWHEIGGSFRIEQQPSKVMVYIQGPASGVDLMVAGLQIFPVDRHARFRYLRMQTDKIRKRDVILKFSGVDSSNYINTMVQVRQTQNNFPIGTCISRMNIDNEDFVNFFVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLDLCQKNKIETRGHCIFWEVDGTVQQWIKSLNQNDLMTAVQNRLNGLLTRYKGKFSHYDVNNEMLHGSFYQDRLGRDIRAKMFKTANQLDPSATLFVNDYHVEDGCDNKSCPEKYMEHILDLQEQGAPVGGVGIQGHIDSPVGPIVCSSLDKLGILGLPIWFTELDVSSINEHVRADDLEVMLREAMAHPAVEGIMLWGFWELFMSRDNSHLVNAEGDINEAGKRFLDLKREWLSHKHDHVDEHGQFSFRGFHGTYNVEVVTPTKKISKTFVLDKGDSPMVVSIDL* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3036 930 PANTHER - 205 930 - -
Lja5g3036 930 PANTHER - 45 194 - -
Lja5g3036 930 SUPERFAMILY (Trans)glycosidases 579 881 IPR017853 -
Lja5g3036 930 SMART glyco_10 624 874 IPR001000 GO:0004553|GO:0005975
Lja5g3036 930 Pfam Glycosyl hydrolase family 10 587 844 IPR001000 GO:0004553|GO:0005975
Lja5g3036 930 Pfam Carbohydrate binding domain 387 530 IPR003305 GO:0016798
Lja5g3036 930 Pfam Carbohydrate binding domain 215 353 IPR003305 GO:0016798
Lja5g3036 930 Pfam Carbohydrate binding domain 44 184 IPR003305 GO:0016798
Lja5g3036 930 PANTHER GLYCOSYL HYDROLASE 205 930 IPR044846 GO:0004553|GO:0005975
Lja5g3036 930 SUPERFAMILY Galactose-binding domain-like 42 198 IPR008979 -
Lja5g3036 930 SUPERFAMILY Galactose-binding domain-like 214 368 IPR008979 -
Lja5g3036 930 Gene3D Glycosidases 576 887 - -
Lja5g3036 930 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 578 873 IPR001000 GO:0004553|GO:0005975
Lja5g3036 930 Coils Coil 856 876 - -
Lja5g3036 930 PANTHER GLYCOSYL HYDROLASE 45 194 IPR044846 GO:0004553|GO:0005975
Lja5g3036 930 SUPERFAMILY Galactose-binding domain-like 385 545 IPR008979 -
Lja5g3036 930 Gene3D - 39 197 - -
Lja5g3036 930 Gene3D - 210 368 - -
Lja5g3036 930 Gene3D - 384 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3036 Lja-Chr5 59346882 59353991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3036 1 930 Glycoside Hydrolase AT1G58370 66.490 0.0 1336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3036 - - lja:Lj0g3v0316669.1 1877.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3036 5 59346882 59353991 Lja5g3036 5 59346882 59353991 ECH
Lja5g3036 5 59346882 59353991 Lja1g4063 1 51442354 51446183 PCT