Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3032 ATGGCTTCTTCTCCTCCCGCTCCCTCTCCCTCTCCTTCCTACTTCACACACATTCCTCACCCTGGTGAGAAGGTTCTGGATGACGACGAATCGCGCGTTCCGATTCATATTGTGACCGCTGCGTCTCAACTTCCTGTTGAGTTTCTGGAACCCTCGCCGGAAAAGAAGCTAGTCATTGGCTTTGACTGCGAGGGTGTTGACTTGTGTCGCAATGGAGAACTCTGCATTATGCAGCTTGCATTTCCTGATGCTATATATCTGGTTGATGCAATCCAAGGGGGAGATGTGCTTATGCAAGCGTGTAAGCCCGCACTTGAGTCTGATCACATCACAAAAGTGATTCATGATTGCAAACGGGATAGTGAGGCATTGTACTTTCAGTTCGGGATCAAGTTAAACAACGTGGTGGATACTCAGATTGCTTATTCACTTATAGAGGAGCAAGAAGGACGGAAGACAGATGAATACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGCACATCATATCTTGAGAAGGAAGAAGTTCGTGTCCTCCTTCGACAGGATCCCAAGTTCTGGAAATACAGACCTTTATCTGAACTAATGGTCCGTACTGCTGCTGATGATGTTCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAACTAAATGAGCGGTCTTTATGGTATCTTGCTGTTCGTGGTGCCTTGTATTGCCGATGTTTCTGTGTGAACAGTAATGACTATGCTGATTGGCCATCTCTGCCTCCAATTCCAGATAAGCTGAAAGCTGACGGAAATGGTCCTGAGGAAGAAATTCTTTCAGTTCTTGATATTCCCCATGGAAAAATGGGATGTGTTATTGGGAAAAAAGGGGCTACGATTCTGTATATTAAAGAGTCCTGCAATGCGGAAATCCAGATTGGAGGTGCCAAGGGCCCACCTGACAAGGTCTTCATCATGGGACCAGTGAAGCAGGTGAGAAAAGCTGAGGCCATGATAAGGGGTAGATTCTTGGACATTAAGTAA 1023 0.4545 MASSPPAPSPSPSYFTHIPHPGEKVLDDDESRVPIHIVTAASQLPVEFLEPSPEKKLVIGFDCEGVDLCRNGELCIMQLAFPDAIYLVDAIQGGDVLMQACKPALESDHITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKTDEYISFVGLLADPRYCGTSYLEKEEVRVLLRQDPKFWKYRPLSELMVRTAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCVNSNDYADWPSLPPIPDKLKADGNGPEEEILSVLDIPHGKMGCVIGKKGATILYIKESCNAEIQIGGAKGPPDKVFIMGPVKQVRKAEAMIRGRFLDIK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3032 340 SUPERFAMILY Ribonuclease H-like 20 250 IPR012337 -
Lja5g3032 340 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 265 337 IPR036612 GO:0003723
Lja5g3032 340 PANTHER - 15 336 - -
Lja5g3032 340 Gene3D K Homology domain, type 1 259 336 IPR036612 GO:0003723
Lja5g3032 340 MobiDBLite consensus disorder prediction 1 15 - -
Lja5g3032 340 Pfam KH domain 275 333 IPR004088 GO:0003723
Lja5g3032 340 Pfam 3'-5' exonuclease 53 221 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lja5g3032 340 ProSiteProfiles Type-1 KH domain profile. 270 332 - -
Lja5g3032 340 SMART kh_6 269 337 IPR004087 GO:0003676
Lja5g3032 340 Gene3D - 5 238 IPR036397 GO:0003676
Lja5g3032 340 MobiDBLite consensus disorder prediction 1 21 - -
Lja5g3032 340 CDD KH-I 275 332 - -
Lja5g3032 340 SMART 35exoneu6 35 222 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lja5g3032 340 CDD Egl_like_exo 48 241 - -
Lja5g3032 340 PANTHER EGALITARIAN, ISOFORM B 15 336 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3032 K18740 - gmx:100788577 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3032 5 59305899 59312999 Lja5g3032 5 59305899 59312999 ECH