Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3031 ATGGGAAGGACGTCACACTTTCAAGCCATGGGATTCAAAGTAATAATCTTCTTTCTCTTGGGGATGGCAGTTACAGTTTGCTGTAACAATGGTGGCTCCTTCTCAACACAGAAGGTTTTGGAAGTTGAGAGAAAAATAAAACATCTTAGAAGGCACTCCTTAAAAACAATCCAGAGTGAAGATGGGGATGTTATTGATTGCATAGAGATTAAAAAGCAACCGGGATTTGATCATCCTGCATTGAAAGATCACAAAATTCAGATGGCTCCAACTTATAATTTAGCTAAGGAGGACATGGAAGAGGATAGTGCTAGTAGTAATACCAAGAATGGGAATATGATGAATTCACAAGCATGGCAGAAAAGTGGAACATGTCCAGAGGGAACAATACCTGTTCGGAGAATACGAAAGAGGGAGCTGCTCAAGGCTCATTCCATTGAAGAATTTGGAAGGAAGAAGCCAAACTTCTCTCGTAGACAAGTTGGTCAGCTGAACCGGAATCTTGATTCCTATGTTGCGCGACAAAACCATTCTAAGGCAATATTGTTCACTGAAGGGTACCGGTTCCTGGGAGGTAAAGGAGACATTAAAGTATGCTGGCCTACTGTTGAAAAGGACGACGAGTACAGCACTTCCCAGGTCTCTCTCTTAAATGGGGAAGCTTACAATGACTATGAGTTGGTTGAAGCCGGATGGATGGTCAATCCAGGTGTGTATGGAGATAGGTCGACTCGGTTATTTGTATATTGGACGGCTGATGGTTCAAGGAAAACAGGTTGCTTTGATCTGACTTGTCCTGGGTTTATTCAGACTAGTAATGAAATTGCCTTGGGGGCAGCAATTTCTCCAATATCATTGCCGGGTGATCTTGGATACACAATAACTATTTCTATCTATAAGGACCCAGATACTAATAATTGGTGGATGCAATTTGGTGAGAAGAACATTGGTTATTGGCCAGCAGAGCTATTTGAATCAATACGTTACAATGCAGCATCAGTGGAGTGGGGTGGTGAAGTTTACAGCACAAGCATTGGGAAAACTCCTCACACTGGAACAGACATGGGTTGTGGAAGATTTGCTACTGATAAGTTAGAAGCGGCTTCAGTGACGAGGATTAGAATTCATGACAATTCTGCCATGTGGAAGTTCCCTGAATGGGTTTATGAATACTCAGATGAATATCGTTGTTATGATGTTTGGTACGTTGGAGATTACGTTGAAGATCCTCTGTTATATTTTGGAGGGCCTGGTAGAAACCCAATGTGCCCATAG 1275 0.422 MGRTSHFQAMGFKVIIFFLLGMAVTVCCNNGGSFSTQKVLEVERKIKHLRRHSLKTIQSEDGDVIDCIEIKKQPGFDHPALKDHKIQMAPTYNLAKEDMEEDSASSNTKNGNMMNSQAWQKSGTCPEGTIPVRRIRKRELLKAHSIEEFGRKKPNFSRRQVGQLNRNLDSYVARQNHSKAILFTEGYRFLGGKGDIKVCWPTVEKDDEYSTSQVSLLNGEAYNDYELVEAGWMVNPGVYGDRSTRLFVYWTADGSRKTGCFDLTCPGFIQTSNEIALGAAISPISLPGDLGYTITISIYKDPDTNNWWMQFGEKNIGYWPAELFESIRYNAASVEWGGEVYSTSIGKTPHTGTDMGCGRFATDKLEAASVTRIRIHDNSAMWKFPEWVYEYSDEYRCYDVWYVGDYVEDPLLYFGGPGRNPMCP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3031 424 MobiDBLite consensus disorder prediction 105 124 - -
Lja5g3031 424 Pfam Neprosin activation peptide 56 160 IPR025521 -
Lja5g3031 424 PANTHER ASLB (DUF239)-RELATED 22 422 - -
Lja5g3031 424 Pfam Neprosin 207 417 IPR004314 -
Lja5g3031 424 MobiDBLite consensus disorder prediction 98 124 - -
Lja5g3031 424 Gene3D - 201 315 - -
Lja5g3031 424 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 22 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3031 Lja-Chr5 59291337 59295427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3031 - - lja:Lj5g3v0358760.1 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3031 5 59291337 59295427 Lja5g3031 5 59291337 59295427 ECH
Lja5g3031 5 59291337 59295427 Lja1g4055 1 51328458 51332003 PCT