Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3029 ATGCAATCCAGGGTTGTGACCCTTGAAGAAGGAAAGGAAAGAACCAACCAGTCCAAAGGCTTGCCTTTAAGACCATTGCGGCTACTTGTTCTGTTTATTGCTCTGTGTGTTGTGTTCTCTGTGATCAGCATATACACTATTAAGCATTTTGGGATAGAGAGTGTTGTCACCACAGTCAGCTCAAGTTTTCAGTTTCAACCATGTAATGAGGGACAGGGTGGTTTGGAAAAATGGATTAGCCCTCCTTCTACATGGATCCACAATATGAGTGACCAAGAATTGCTTTGGAGAGCTTCCTTTGTTCCTCGGATCAAGGATTACCCTTTTGAAAGAGTTCCCAAGATTGCTTTCATGTTCTTGACAAAAGGACCATTGCCCTTAGCACCACTTTGGGAGAGGTTTCTGAAGGGGCATGAAAGGCATTATTCTGTATATATTCATTCACTGCCATCATATCAAGCTCAGTTTCCTCCTTCTTCTGTCTTTTATAAGAGGCAGATCCCTAGTCAGGTTTCTGAGTGGGGAAGGATGAGCATGTGTGATGCTGAACGAAGACTACTTGCTAATGCATTGCTTGACATTTCCAATGAGTGGTTTATTCTGCTGTCTGAGTCATGCATCCCTCTTTATAAATTCAGTTTCATTTACCAATACATAATGAAATCCAAATACAGTTTCATGGGTGCATTTGATGATCCCGGTCCATACGGAAGAGGACGCTATAACGAGAAGATGGCCCCTCTGGTGAACATCACAAAGTGGCGTAAAGGCTCACAATGGTTTGAAATAAACAGAAAGCTTGCCATCACCATTGTTGAAGACACTACATTTTATCCAAAGTTTGAAACATATTGTAGACCAGCTTGTTATGTGGATGAGCACTATTTCCCTACCATGTTGACCATTCAAGCAGGGAATGCCTTGGCAAATAGGAGCATTACTTGGGTGGACTGGTCCAGAGGTGGAGCTCACCCTGCTACCTTTGGAAAAACAGATATTTCAGAGGAGTTTCTGAATCGAGTTCGTGCCGGTCACCATTGCCAATACAACAATGGAAACTCTTCTGCTTGTTTTCTTTTTGCCAGAAAATTTTCTCCTAGTACTTTGGAGCCTTTGTTACATATGGTGGATGCAAAGGTCTTGGACTTCTGA 1152 0.4245 MQSRVVTLEEGKERTNQSKGLPLRPLRLLVLFIALCVVFSVISIYTIKHFGIESVVTTVSSSFQFQPCNEGQGGLEKWISPPSTWIHNMSDQELLWRASFVPRIKDYPFERVPKIAFMFLTKGPLPLAPLWERFLKGHERHYSVYIHSLPSYQAQFPPSSVFYKRQIPSQVSEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFSFIYQYIMKSKYSFMGAFDDPGPYGRGRYNEKMAPLVNITKWRKGSQWFEINRKLAITIVEDTTFYPKFETYCRPACYVDEHYFPTMLTIQAGNALANRSITWVDWSRGGAHPATFGKTDISEEFLNRVRAGHHCQYNNGNSSACFLFARKFSPSTLEPLLHMVDAKVLDF* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3029 383 Pfam Core-2/I-Branching enzyme 115 341 IPR003406 GO:0016020|GO:0016757
Lja5g3029 383 PANTHER - 4 377 - -
Lja5g3029 383 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 4 377 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3029 Lja-Chr5 59280357 59284550 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3029 - - gmx:100785919 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3029 5 59280357 59284550 Lja5g3029 5 59280357 59284550 ECH