Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3026 ATGGAATCTTCTCAATTTCCCTCCCTTCTCTTTTTCCTCCTCACCGCAGCCTTCCTCGCCGTCGCCGCCGCTGGCCGTGACCTCACCGGCGATCATCTCCGCCTTCCCTCCCAAGCAGAAAGATTCTTCCGTGAACCCGAGAACGATGACAACGTTCAAGGGACTAGGTGGGCCATCTTACTTGCCGGTTCCAGTGGCTACTGGAACTACAGGCATCAGGCTGATGTTTGCCATGCCTATCAAATCCTGAGGCAAGGTGGCCTGAAAGAAGAAAATATTATTGTTTTCATGTATGATGACATTGCTTACAATGAAGAGAACCCTAGGCAGGGAGTCATCATTAACAAACCAGATGGGGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGAGCAGATGTTACTGCTAGCAACTTTTATGCTGCTTTACTTGGAAATAAGTCCGCTCTTACTGGCGGCAGTGGGAAGGTTGTGGATAGTGGCCCCAATGATCATATATTTGTATACTATACTGACCATGGAGGTCCAGGGGTGCTTGGGATGCCTGCTGGTCCTTACTTATATGCAGAGGATCTGATTGAAGTCTTGAAGAAAAAGCATGCTTCCGGAACATATAAAAGCCTAGTATTTTATCTGGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATCTATGCAACAACAGCTTCAAACGCAGAAGAAAGCAGTTGGGGAACCTATTGCCCTGGCGAGTACCCTAGTCCTCCCCCAGAATATACAACCTGCTTGGGTGATCTGTACAGTGTTGCTTGGATGGAAGATAGTGATATACACAACCTGCGAACAGAATCCTTGCACCAACAATATAAATTGGTTAAAGACAGGACTATCAGTGGAAGTGAATACTATGGCTCTCACGTGATGCAGTATGGTGATATAGGTCTTAGCAGCAATCATCTCTTCCTATATTTGGGAACAAATCCTTCTAATGATAATATTACTTTTGTCGACGAAAACTCCTTGAGGACACCTTCAAAAGCAGTCAACCAACGGGATGCTGATCTTGTCCATTTCTGGGATAAGTTCCGCAAATCTCCTGAGGGTTCTCGAAGGAAAAATGCAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCACAGAATGCATGTAGACAACAGTGTGGAGCTTATTGGAAAGCTCTTGTTTGGCATTGAAAAGGGTCCAGAAGTGTTCAAATCTGTTAGACCTGCAGGATTGCCACTTGTTGATGACTGGGTCTGCCTGAAAAACATGGTAAGGACTTTTGAGACACATTGTGGATCGCTGTCTCAATATGGGATGAAACACATGCGGTCTTTTGCGAACATCTGCAATGCAGGAATACAGAATGAGCAAATGACTGAGGCCTCCTCACAAGCTTGTGTCAGTGTTCCTGCTAATCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAG 1476 0.4539 MESSQFPSLLFFLLTAAFLAVAAAGRDLTGDHLRLPSQAERFFREPENDDNVQGTRWAILLAGSSGYWNYRHQADVCHAYQILRQGGLKEENIIVFMYDDIAYNEENPRQGVIINKPDGGDVYEGVPKDYTGADVTASNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPAGPYLYAEDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYTTCLGDLYSVAWMEDSDIHNLRTESLHQQYKLVKDRTISGSEYYGSHVMQYGDIGLSSNHLFLYLGTNPSNDNITFVDENSLRTPSKAVNQRDADLVHFWDKFRKSPEGSRRKNAAQKQVLEAMSHRMHVDNSVELIGKLLFGIEKGPEVFKSVRPAGLPLVDDWVCLKNMVRTFETHCGSLSQYGMKHMRSFANICNAGIQNEQMTEASSQACVSVPANPWSSLQRGFSA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3026 491 Gene3D - 54 350 - -
Lja5g3026 491 PIRSF Legumain 4 491 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 PRINTS Hemoglobinase (C13) cysteine protease signature 206 222 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 PRINTS Hemoglobinase (C13) cysteine protease signature 157 176 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 PRINTS Hemoglobinase (C13) cysteine protease signature 57 81 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 PRINTS Hemoglobinase (C13) cysteine protease signature 82 111 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 PRINTS Hemoglobinase (C13) cysteine protease signature 129 144 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 PIRSF AE 4 491 IPR043577 GO:0004197|GO:0051603
Lja5g3026 491 PANTHER HEMOGLOBINASE FAMILY MEMBER 1 490 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 Pfam Peptidase C13 family 56 326 IPR001096 GO:0006508|GO:0008233
Lja5g3026 491 Gene3D - 351 479 IPR046427 -
Lja5g3026 491 PANTHER VACUOLAR-PROCESSING ENZYME 1 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3026 Lja-Chr5 59214329 59219439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3026 K01369 - gmx:547700 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3026 5 59214329 59219439 Lja5g3026 5 59214329 59219439 ECH