Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3982 ATGGCTTCTTCGAGCGCCGCAGCTCCTGGATCCGCTGATTCCACTGCAGCACGAAGAAACACCAAACGACCCAAGTATTCAAAGTTTACACAGCAAGAACTTCCAGCATGCAAGCCAATTCTTACCCCTCGAGCGGTTATTTCAGCATTCTTGCTTGTCAGTGTTGTATTTGTTCCTATCGGAGTTGCTTCACTAATTGCTTCGAGAAAGGTTGTTGAAATTGTTCATAGGTATGAATCATCGTGCTTGAAAGGCGTAGATAATAAGATAGCATACATTCAGAGTTCTGCAGATAAAACATGCAAAATAACACTAAAAGTGGACAAGCACATGAAGTCACCGATTTATGTCTACTACCAGCTTGACAACTTTTACCAGAATCATCGCCGGTATGTTAAAAGCCGAAGTGATCAGCAATTGAGGGATCCAAAAGAAGAGAGCTCAACAAGTGCTTGTAAGCCTGAAGATATTGCCAATGGTAGGGCAATTGTGCCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGATACATACAGCTTCTCCTATAAAAACAAGAGTTTGACAGTTAATAAGAAAGGCATCGCCTGGAAGAGTGATAGGGAGCACAAATTTGGAAAAAATGTTCTTCCTAAAAACTTCCAGAATGGCTCCATTATAGGTGGTGCTCATCTCAATGAATCCATAGCTTTGAGTGAGCAGGAGGATCTTATTGTCTGGATGAGAACTGCTGCCTTGCCAACGTTTAGAAAGTTGTACGGAAAGATAGAGGTGGATCTCGATGAAGGTGAGAACATAAGTGTAACGCTTCAAAATAACTACAACACATACAGTTTTAATGGCAAGAAAAAGCTCGTACTATCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTTGGCATTGCTTATCTCACCGTTGGAGGGTTGTGCTTCTTTTTGGCTTTGGCTTTTACCATTGTATATTTCGTCAAGCCAAGGCAACTGGGAGATCCCTCATATTTGTCATGGAATAGGAATCCAGGAGGGCACTAG 1032 0.4196 MASSSAAAPGSADSTAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFVPIGVASLIASRKVVEIVHRYESSCLKGVDNKIAYIQSSADKTCKITLKVDKHMKSPIYVYYQLDNFYQNHRRYVKSRSDQQLRDPKEESSTSACKPEDIANGRAIVPCGLIAWSLFNDTYSFSYKNKSLTVNKKGIAWKSDREHKFGKNVLPKNFQNGSIIGGAHLNESIALSEQEDLIVWMRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGGH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3982 343 PANTHER ALA-INTERACTING SUBUNIT 3 2 342 - -
Lja3g3982 343 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 327 IPR005045 GO:0016020
Lja3g3982 343 MobiDBLite consensus disorder prediction 1 17 - -
Lja3g3982 343 PANTHER CELL CYCLE CONTROL PROTEIN 50 2 342 IPR005045 GO:0016020
Lja3g3982 343 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g3982 343 PIRSF Lem3/Cdc50 1 339 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3982 Lja-Chr3 78594661 78601824 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3982 3 78594661 78601824 Lja3g3982 3 78594661 78601824 ECH
Lja3g3982 3 78594661 78601824 Lja3g5099 3 93341313 93344049 PCT