Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4073 ATGACATCGAACAAAGACAAAAGCGATGACCCCAAGCTTTGGGGAGTTTTCCTCTTCGGCCTCATTGGCGCCACCGCCTCTACCTACGCGTTCGGTCACCTGCGGAGGACTGTTGATTGGTTCTATGTTCAGATGGCGAAGTCGCAGGGGTCGTGGAAAGGACGGAGCAGCGGTTCTTCGCGATCAGCTTCTCAGGAGGAGGCGTGGAGGAGGCACAATAAGCGGTTGCAAGAGGAATATGAGGAGGAGATGGAGAGAGTGGAAAGAATAAGGCGTATGCAAAGTGTGTTTAACAGAGAAAGAAATAAGTACAAAAGATCCTACGAAAGCTGGAGGGAAAATGGTTCTGGAACATATCATCAGCATTTCCAGAGAGAAGATTGGTATTGGCAGGCCGATACATCCTTCAGAGACAGGAGGACTAATTATCGACAACCTCCAAGAGAGAGTGGAAACTATGCATTATCACATCACTACTCTGTTTTGGGTCTTGACAGGTTTAGACAAGCGCCATATTCAGATGCTGAGATTAAATCAGCATTTAGGACCAAGGCAAAGGAACACCATCCTGATCAGAACCAGAATAATAGAGAGGTTGCTGAGGCAAAGTTCAAAGAAGTGATGTCTTCATACGAGGCCATAAAACAGGAAAGAAAGAACCAGAATCTGTAA 672 0.4643 MTSNKDKSDDPKLWGVFLFGLIGATASTYAFGHLRRTVDWFYVQMAKSQGSWKGRSSGSSRSASQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRSYESWRENGSGTYHQHFQREDWYWQADTSFRDRRTNYRQPPRESGNYALSHHYSVLGLDRFRQAPYSDAEIKSAFRTKAKEHHPDQNQNNREVAEAKFKEVMSSYEAIKQERKNQNL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4073 223 MobiDBLite consensus disorder prediction 50 71 - -
Lja1g4073 223 SMART dnaj_3 156 219 IPR001623 -
Lja1g4073 223 Gene3D DnaJ domain 151 223 IPR036869 -
Lja1g4073 223 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 221 - -
Lja1g4073 223 SUPERFAMILY Chaperone J-domain 156 221 IPR036869 -
Lja1g4073 223 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 221 - -
Lja1g4073 223 CDD DnaJ 158 212 IPR001623 -
Lja1g4073 223 Coils Coil 66 93 - -
Lja1g4073 223 PRINTS DnaJ domain signature 181 196 IPR001623 -
Lja1g4073 223 PRINTS DnaJ domain signature 199 219 IPR001623 -
Lja1g4073 223 Pfam DnaJ domain 158 221 IPR001623 -
Lja1g4073 223 ProSiteProfiles dnaJ domain profile. 157 219 IPR001623 -
Lja1g4073 223 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4073 Lja-Chr1 51715899 51720033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4073 - - gmx:100812371 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4073 1 51715899 51720033 Lja1g4073 1 51715899 51720033 ECH
Lja5g3046 5 59717073 59720380 Lja1g4073 1 51715899 51720033 PCT